Variant report

Variant rs12081278
Chromosome Location chr1:228485396-228485397
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
2 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:228464400-228489200 Strong transcription Left Ventricle heart
4 chr1:228464600-228487000 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
6 chr1:228471800-228489200 Weak transcription Duodenum Mucosa Duodenum
7 chr1:228472200-228490000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:228472400-228486000 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:228472400-228486200 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:228473000-228488400 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:228476800-228485600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:228480400-228489600 Strong transcription HSMMtube muscle
13 chr1:228481000-228493600 Strong transcription Fetal Muscle Trunk muscle
14 chr1:228481800-228487400 Weak transcription Pancreas Pancrea
15 chr1:228481800-228487800 Strong transcription Skeletal Muscle Male skeletal muscle
16 chr1:228482000-228487600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:228482200-228485600 Weak transcription Fetal Thymus thymus
18 chr1:228482200-228489200 Weak transcription Primary T cells fromperipheralblood blood
19 chr1:228482400-228487400 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:228482400-228492200 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr1:228482800-228485600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:228482800-228489200 Weak transcription Fetal Kidney kidney
23 chr1:228483000-228486200 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:228483000-228488400 Weak transcription Stomach Smooth Muscle stomach
25 chr1:228483200-228485400 Weak transcription Brain Germinal Matrix brain
26 chr1:228483200-228485600 Weak transcription Fetal Heart heart
27 chr1:228483200-228485600 Weak transcription Fetal Intestine Small intestine
28 chr1:228483200-228485600 Weak transcription Lung lung
29 chr1:228483200-228486200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr1:228483200-228486200 Weak transcription Thymus Thymus
31 chr1:228483200-228487600 Weak transcription Ovary ovary
32 chr1:228483200-228488600 Weak transcription Gastric stomach
33 chr1:228483200-228489200 Strong transcription Fetal Lung lung
34 chr1:228483400-228485400 Weak transcription Fetal Stomach stomach
35 chr1:228483400-228485600 Weak transcription Fetal Brain Female brain
36 chr1:228483600-228486000 Weak transcription Right Ventricle heart
37 chr1:228484200-228491000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:228484400-228485400 Weak transcription Psoas Muscle Psoas
39 chr1:228484400-228487400 ZNF genes & repeats Dnd41 blood
40 chr1:228484600-228485800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr1:228484600-228486000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:228484600-228490800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
43 chr1:228484600-228490800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:228484800-228485400 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
45 chr1:228484800-228485600 ZNF genes & repeats A549 lung
46 chr1:228484800-228486600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:228484800-228488800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
48 chr1:228484800-228489200 Strong transcription Primary T cells from cord blood blood
49 chr1:228484800-228490600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
50 chr1:228485000-228485600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung

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