Variant report

Variant rs60964166
Chromosome Location chr1:228463119-228463120
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228445000-228463200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:228455400-228484800 Weak transcription A549 lung
3 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
4 chr1:228456600-228463200 Weak transcription Aorta Aorta
5 chr1:228457200-228472000 Weak transcription Fetal Heart heart
6 chr1:228459800-228469600 Weak transcription HSMMtube muscle
7 chr1:228461800-228463400 Bivalent Enhancer Placenta Placenta
8 chr1:228462400-228463200 Enhancers Gastric stomach
9 chr1:228462400-228463200 Enhancers Spleen Spleen
10 chr1:228462400-228464200 Weak transcription Dnd41 blood
11 chr1:228462600-228463400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:228462600-228463400 Flanking Active TSS Stomach Smooth Muscle stomach
13 chr1:228462600-228464400 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:228462800-228463200 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:228462800-228463200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
16 chr1:228462800-228463200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
17 chr1:228462800-228463200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
18 chr1:228462800-228463200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
19 chr1:228462800-228463200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
20 chr1:228462800-228463200 Enhancers Cortex derived primary cultured neurospheres brain
21 chr1:228462800-228463200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:228462800-228463200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr1:228462800-228463200 Flanking Active TSS Colon Smooth Muscle Colon
24 chr1:228462800-228463200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
25 chr1:228462800-228463200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
26 chr1:228462800-228463200 Enhancers Sigmoid Colon Sigmoid Colon
27 chr1:228462800-228463200 Flanking Active TSS K562 blood
28 chr1:228462800-228463400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
29 chr1:228462800-228463600 Flanking Active TSS Primary T cells fromperipheralblood blood
30 chr1:228462800-228463600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
31 chr1:228462800-228463600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:228462800-228463600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
33 chr1:228462800-228463600 Flanking Active TSS Duodenum Mucosa Duodenum
34 chr1:228462800-228464000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:228462800-228464200 Active TSS H9 Cell Line embryonic stem cell
36 chr1:228462800-228464200 Active TSS NHEK skin
37 chr1:228462800-228464400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr1:228462800-228464400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr1:228462800-228464400 Active TSS Duodenum Smooth Muscle Duodenum
40 chr1:228462800-228464400 Active TSS Fetal Kidney kidney
41 chr1:228462800-228464400 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
42 chr1:228462800-228464400 Bivalent Enhancer Stomach Mucosa stomach
43 chr1:228462800-228464600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:228462800-228464600 Flanking Active TSS Adipose Nuclei Adipose
45 chr1:228462800-228464600 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
46 chr1:228463000-228463200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
47 chr1:228463000-228463200 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr1:228463000-228463200 Flanking Bivalent TSS/Enh hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:228463000-228463200 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:228463000-228463200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell

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