Variant report

Variant rs60608705
Chromosome Location chr1:228472259-228472260
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228455400-228484800 Weak transcription A549 lung
2 chr1:228456400-228485800 Weak transcription Hela-S3 cervix
3 chr1:228463800-228481400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:228464200-228473800 Weak transcription Psoas Muscle Psoas
5 chr1:228464200-228473800 Weak transcription NHEK skin
6 chr1:228464200-228478000 Strong transcription Dnd41 blood
7 chr1:228464200-228491600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:228464400-228473000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:228464400-228478400 Strong transcription Thymus Thymus
10 chr1:228464400-228479600 Weak transcription Right Atrium heart
11 chr1:228464400-228481400 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr1:228464400-228482000 Weak transcription Fetal Kidney kidney
13 chr1:228464400-228489200 Strong transcription Left Ventricle heart
14 chr1:228464600-228473600 Weak transcription Primary B cells from cord blood blood
15 chr1:228464600-228475400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:228464600-228476800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr1:228464600-228481400 Weak transcription Primary hematopoietic stem cells blood
18 chr1:228464600-228483200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:228464600-228483200 Strong transcription Fetal Intestine Small intestine
20 chr1:228464600-228487000 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:228464800-228472600 Strong transcription Fetal Thymus thymus
22 chr1:228464800-228476800 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr1:228464800-228477400 Strong transcription Primary T cells from cord blood blood
24 chr1:228465000-228472400 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:228465000-228476000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:228465000-228483600 Strong transcription Right Ventricle heart
27 chr1:228465000-228498000 Weak transcription Fetal Brain Male brain
28 chr1:228465200-228483400 Weak transcription Colonic Mucosa Colon
29 chr1:228465200-228483400 Strong transcription Fetal Stomach stomach
30 chr1:228465600-228474000 Weak transcription Brain Anterior Caudate brain
31 chr1:228465600-228483400 Strong transcription Fetal Brain Female brain
32 chr1:228465800-228476600 Strong transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:228466200-228472400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:228466200-228472600 Strong transcription Brain Germinal Matrix brain
35 chr1:228466200-228475800 Strong transcription Fetal Intestine Large intestine
36 chr1:228466200-228477200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr1:228466400-228472400 Strong transcription H9 Cell Line embryonic stem cell
38 chr1:228466400-228472800 Strong transcription H1 Cell Line embryonic stem cell
39 chr1:228466600-228472400 Strong transcription iPS-20b Cell Line embryonic stem cell
40 chr1:228467200-228484200 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:228467800-228473600 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr1:228468400-228482600 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:228469200-228479800 Weak transcription Pancreas Pancrea
44 chr1:228470000-228473400 Weak transcription Primary B cells from peripheral blood blood
45 chr1:228470600-228473800 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr1:228470800-228472400 Strong transcription iPS-18 Cell Line embryonic stem cell
47 chr1:228470800-228472600 Strong transcription HSMMtube muscle
48 chr1:228470800-228473400 Weak transcription Stomach Smooth Muscle stomach
49 chr1:228471200-228472600 Strong transcription Lung lung
50 chr1:228471200-228484200 Weak transcription Primary hematopoietic stem cells short term culture blood

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