Variant report

Variant rs3795811
Chromosome Location chr1:228538968-228538969
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
3 chr1:228522000-228541200 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:228527400-228545800 Weak transcription Fetal Brain Male brain
5 chr1:228527600-228546600 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr1:228527600-228562400 Weak transcription Brain Anterior Caudate brain
7 chr1:228527800-228555800 Weak transcription Gastric stomach
8 chr1:228528000-228539200 Weak transcription Ovary ovary
9 chr1:228528200-228543400 Weak transcription HSMMtube muscle
10 chr1:228528400-228539000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:228529800-228539200 Weak transcription Primary T cells fromperipheralblood blood
12 chr1:228530000-228547200 Weak transcription Pancreas Pancrea
13 chr1:228531200-228549600 Weak transcription Esophagus oesophagus
14 chr1:228531200-228551200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr1:228532000-228540400 Weak transcription Fetal Brain Female brain
16 chr1:228532200-228545800 Weak transcription Dnd41 blood
17 chr1:228532400-228555200 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:228532400-228562400 Weak transcription Fetal Lung lung
19 chr1:228532600-228539200 Weak transcription Lung lung
20 chr1:228532800-228539800 Weak transcription Primary T cells from cord blood blood
21 chr1:228533200-228545800 Weak transcription Spleen Spleen
22 chr1:228533200-228548200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:228535200-228554200 Weak transcription Right Atrium heart
24 chr1:228535800-228541600 Weak transcription Fetal Heart heart
25 chr1:228536600-228544400 Strong transcription Left Ventricle heart
26 chr1:228536800-228540200 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr1:228537000-228545200 Strong transcription Fetal Muscle Trunk muscle
28 chr1:228537000-228554800 Weak transcription Fetal Intestine Large intestine
29 chr1:228537400-228540200 Strong transcription Thymus Thymus
30 chr1:228537400-228544200 Strong transcription Right Ventricle heart
31 chr1:228537400-228545600 Strong transcription Fetal Stomach stomach
32 chr1:228537800-228539000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:228537800-228539000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:228537800-228540400 Strong transcription Skeletal Muscle Female skeletal muscle
35 chr1:228537800-228542800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:228538000-228539400 Strong transcription Skeletal Muscle Male skeletal muscle
37 chr1:228538200-228539000 Weak transcription Fetal Muscle Leg muscle
38 chr1:228538400-228541000 Strong transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:228538400-228542200 Strong transcription Fetal Intestine Small intestine
40 chr1:228538600-228540000 Strong transcription Primary T helper cells PMA-I stimulated --
41 chr1:228538600-228541400 Strong transcription Brain Germinal Matrix brain
42 chr1:228538600-228541600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:228538800-228539000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:228538800-228540600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr1:228538800-228541200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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