The 2.0 version of rSNPBase

Variant report

Variant rs3804127
Chromosome Location chr6:25568117-25568118
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:25471600-25597200 Weak transcription Gastric stomach
2 chr6:25516800-25606400 Weak transcription Lung lung
3 chr6:25522400-25588600 Weak transcription HMEC breast
4 chr6:25523000-25577200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr6:25530800-25584200 Weak transcription Fetal Intestine Small intestine
6 chr6:25538600-25592800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr6:25539200-25582000 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr6:25540600-25580200 Weak transcription Fetal Thymus thymus
9 chr6:25541400-25576200 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr6:25541600-25584400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:25541600-25612000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr6:25544000-25593600 Weak transcription Fetal Lung lung
13 chr6:25547200-25600600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:25556200-25618000 Weak transcription Primary B cells from cord blood blood
15 chr6:25557200-25591400 Weak transcription Ovary ovary
16 chr6:25564200-25582600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:25564400-25576800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr6:25565000-25579800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr6:25565400-25570000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:25565400-25583400 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr6:25565600-25570400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:25565800-25581400 Weak transcription Fetal Intestine Large intestine
23 chr6:25566000-25581400 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr6:25566400-25581000 Weak transcription Aorta Aorta
25 chr6:25566400-25581600 Weak transcription Duodenum Mucosa Duodenum
26 chr6:25568000-25581400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015