Variant report

Variant	rs3822285
Chromosome Location	chr4:110930126-110930127
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10434002	0.89[CHB][hapmap];0.81[ASN][1000 genomes]
rs11098058	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11098063	0.99[ASN][1000 genomes]
rs11568853	0.89[CHB][hapmap]
rs11568901	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs11568927	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs11568941	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs11568946	0.89[CHB][hapmap];0.83[JPT][hapmap]
rs11568975	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs11568990	0.94[CHB][hapmap];0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs11568991	0.94[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs11569003	0.94[CHB][hapmap];0.83[JPT][hapmap];0.81[ASN][1000 genomes]
rs11569102	1.00[ASN][1000 genomes]
rs11569103	1.00[ASN][1000 genomes]
rs11569129	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs11569142	1.00[ASN][1000 genomes]
rs17041036	0.89[CHB][hapmap]
rs17041134	0.94[CHB][hapmap];0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs1860131	0.89[CHB][hapmap];0.81[JPT][hapmap]
rs2074389	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2237043	0.89[CHB][hapmap];0.82[JPT][hapmap]
rs2237046	0.81[ASN][1000 genomes]
rs2237047	0.89[CHB][hapmap]
rs2237048	0.94[CHB][hapmap];0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs2282786	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2298988	0.88[CHB][hapmap];0.82[JPT][hapmap]
rs2298994	0.94[CHB][hapmap];0.88[JPT][hapmap];0.82[ASN][1000 genomes]
rs2298995	0.94[CHB][hapmap];0.81[JPT][hapmap];0.82[ASN][1000 genomes]
rs2298997	0.88[CHB][hapmap]
rs2299002	0.99[ASN][1000 genomes]
rs2302135	0.94[CHB][hapmap];0.88[JPT][hapmap];0.82[ASN][1000 genomes]
rs3733628	0.89[CHB][hapmap];0.88[JPT][hapmap]
rs3796943	0.87[CHB][hapmap]
rs3796949	0.88[CHB][hapmap];0.82[JPT][hapmap]
rs59242631	0.82[ASN][1000 genomes]
rs9307346	0.88[CHB][hapmap];0.82[JPT][hapmap]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110907000-110932400	Weak transcription	Psoas Muscle	Psoas
2	chr4:110910400-110935200	Weak transcription	Pancreas	Pancrea
3	chr4:110919000-110935200	Weak transcription	Left Ventricle	heart
4	chr4:110920800-110935800	Strong transcription	Skeletal Muscle Female	skeletal muscle
5	chr4:110926800-110930400	Enhancers	Fetal Heart	heart
6	chr4:110926800-110931200	Enhancers	Liver	Liver
7	chr4:110927400-110931000	Strong transcription	Skeletal Muscle Male	skeletal muscle
8	chr4:110928400-110931400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:110928400-110931400	Enhancers	Fetal Intestine Large	intestine
10	chr4:110929600-110930200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:110929800-110930200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr4:110930000-110930800	Weak transcription	Fetal Kidney	kidney
13	chr4:110930000-110937200	Weak transcription	Fetal Intestine Small	intestine

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