Variant report

Variant	rs3822482
Chromosome Location	chr5:35232227-35232228
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10059874	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10074938	0.80[ASN][1000 genomes]
rs12189146	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13163769	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13361664	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1610218	0.82[CEU][hapmap]
rs34404920	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35272298	0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6451191	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6451192	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6883649	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7712482	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7726240	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7731880	1.00[CEU][hapmap];0.90[CHB][hapmap]
rs7733450	1.00[CEU][hapmap];0.81[CHB][hapmap];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7733703	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7734321	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9687437	0.82[CEU][hapmap]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35230800-35233800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr5:35230800-35234800	Weak transcription	Pancreas	Pancrea
3	chr5:35230800-35237000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr5:35230800-35246000	Weak transcription	Gastric	stomach
5	chr5:35230800-35247200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr5:35231000-35232400	Weak transcription	Placenta	Placenta
7	chr5:35231000-35237800	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr5:35231000-35237800	Weak transcription	Stomach Mucosa	stomach
9	chr5:35231400-35237000	Weak transcription	Fetal Intestine Small	intestine
10	chr5:35231400-35237600	Weak transcription	Fetal Intestine Large	intestine
11	chr5:35232200-35232400	Enhancers	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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