The 2.0 version of rSNPBase

Variant report

Variant rs38472
Chromosome Location chr7:30593231-30593232
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30554400-30596400 Weak transcription Fetal Brain Female brain
2 chr7:30561600-30606400 Weak transcription Rectal Smooth Muscle rectum
3 chr7:30563000-30599800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:30564400-30612200 Weak transcription Colon Smooth Muscle Colon
5 chr7:30569000-30602600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr7:30574800-30601000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr7:30575600-30600000 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr7:30578000-30598200 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr7:30578200-30601200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr7:30586200-30595800 Weak transcription Fetal Intestine Large intestine
11 chr7:30586200-30601400 Weak transcription Gastric stomach
12 chr7:30586600-30620400 Weak transcription Fetal Thymus thymus
13 chr7:30586800-30596200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr7:30587200-30602400 Weak transcription Ovary ovary
15 chr7:30587600-30594000 Weak transcription Fetal Stomach stomach
16 chr7:30587600-30596000 Weak transcription Aorta Aorta
17 chr7:30589200-30596200 Weak transcription H1 Cell Line embryonic stem cell
18 chr7:30589600-30598800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr7:30590000-30593800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr7:30590000-30600400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr7:30590200-30594800 Weak transcription Primary T cells from cord blood blood
22 chr7:30590200-30602600 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr7:30590600-30595800 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr7:30590800-30595600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr7:30590800-30597800 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr7:30591000-30595000 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr7:30591000-30595200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr7:30591000-30595200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr7:30591000-30596000 Weak transcription Brain Angular Gyrus brain
30 chr7:30591000-30596000 Weak transcription Fetal Brain Male brain
31 chr7:30591000-30596200 Weak transcription Fetal Intestine Small intestine
32 chr7:30591000-30596200 Weak transcription Lung lung
33 chr7:30591000-30596200 Weak transcription Spleen Spleen
34 chr7:30591000-30599000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr7:30591000-30601400 Weak transcription Colonic Mucosa Colon
36 chr7:30591200-30595000 Weak transcription HSMM muscle
37 chr7:30591200-30595600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr7:30591200-30595600 Weak transcription Brain Cingulate Gyrus brain
39 chr7:30591200-30595800 Weak transcription Stomach Smooth Muscle stomach
40 chr7:30591200-30596000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr7:30591200-30596000 Weak transcription Brain Anterior Caudate brain
42 chr7:30591200-30596200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr7:30591200-30596200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr7:30591200-30596200 Weak transcription Brain Substantia Nigra brain
45 chr7:30591200-30596200 Weak transcription Esophagus oesophagus
46 chr7:30591200-30596600 Weak transcription Brain Hippocampus Middle brain
47 chr7:30591200-30598000 Weak transcription HSMMtube muscle
48 chr7:30591200-30598200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr7:30591200-30598400 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr7:30591200-30599000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015