The 2.0 version of rSNPBase

Variant report

Variant rs38427
Chromosome Location chr7:30548904-30548905
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30545000-30584600 Weak transcription Aorta Aorta
2 chr7:30545200-30551600 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr7:30545200-30552000 Weak transcription Gastric stomach
4 chr7:30545200-30556800 Weak transcription Pancreas Pancrea
5 chr7:30545200-30559800 Weak transcription Primary neutrophils fromperipheralblood blood
6 chr7:30545200-30562200 Weak transcription Small Intestine intestine
7 chr7:30545200-30587600 Weak transcription HSMMtube muscle
8 chr7:30545400-30549400 Weak transcription Fetal Lung lung
9 chr7:30545400-30549400 Weak transcription Stomach Mucosa stomach
10 chr7:30545400-30549600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr7:30545400-30549600 Weak transcription Duodenum Mucosa Duodenum
12 chr7:30545400-30550000 Weak transcription Adipose Nuclei Adipose
13 chr7:30545400-30559600 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr7:30545400-30560200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr7:30545400-30560600 Weak transcription Brain Substantia Nigra brain
16 chr7:30545400-30560600 Weak transcription Colon Smooth Muscle Colon
17 chr7:30545400-30576200 Weak transcription Stomach Smooth Muscle stomach
18 chr7:30545400-30576600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr7:30545600-30549200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr7:30545600-30549400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr7:30545600-30586200 Weak transcription Brain Anterior Caudate brain
22 chr7:30548000-30550600 Enhancers Placenta Placenta
23 chr7:30548400-30550200 Enhancers Fetal Intestine Large intestine
24 chr7:30548600-30549600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr7:30548600-30549800 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr7:30548600-30549800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr7:30548600-30550000 Enhancers HMEC breast
28 chr7:30548600-30550200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr7:30548600-30550200 Enhancers NHEK skin
30 chr7:30548800-30549000 Enhancers Fetal Intestine Small intestine
31 chr7:30548800-30549000 Enhancers Placenta Amnion Placenta Amnion
32 chr7:30548800-30550400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015