The 2.0 version of rSNPBase

Variant report

Variant rs38483
Chromosome Location chr7:30602598-30602599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30561600-30606400 Weak transcription Rectal Smooth Muscle rectum
2 chr7:30564400-30612200 Weak transcription Colon Smooth Muscle Colon
3 chr7:30569000-30602600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr7:30586600-30620400 Weak transcription Fetal Thymus thymus
5 chr7:30590200-30602600 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr7:30591200-30602600 Weak transcription Right Ventricle heart
7 chr7:30591200-30602600 Weak transcription Thymus Thymus
8 chr7:30591200-30602800 Weak transcription Osteobl bone
9 chr7:30591200-30604000 Weak transcription Stomach Mucosa stomach
10 chr7:30591200-30606200 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr7:30591200-30610200 Weak transcription Small Intestine intestine
12 chr7:30591200-30612400 Weak transcription Brain Germinal Matrix brain
13 chr7:30591200-30633400 Weak transcription Psoas Muscle Psoas
14 chr7:30591400-30603000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr7:30591400-30603000 Weak transcription A549 lung
16 chr7:30592600-30602600 Weak transcription HepG2 liver
17 chr7:30593000-30606600 Weak transcription Fetal Kidney kidney
18 chr7:30593800-30609400 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr7:30595600-30609000 Strong transcription Primary monocytes fromperipheralblood blood
20 chr7:30595800-30608600 Strong transcription Placenta Placenta
21 chr7:30595800-30608800 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr7:30596200-30607200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr7:30596200-30608200 Strong transcription Fetal Intestine Small intestine
24 chr7:30596400-30603600 Strong transcription Liver Liver
25 chr7:30596600-30614400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr7:30596800-30606400 Weak transcription Esophagus oesophagus
27 chr7:30597000-30603600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr7:30597200-30603600 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr7:30597400-30633200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr7:30597600-30607400 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr7:30597600-30624400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr7:30597800-30602800 Weak transcription Dnd41 blood
33 chr7:30598200-30604400 Strong transcription Primary hematopoietic stem cells short term culture blood
34 chr7:30598400-30608600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr7:30598400-30623600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr7:30598800-30602600 Enhancers HUVEC blood vessel
37 chr7:30598800-30603600 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr7:30598800-30606200 Weak transcription Left Ventricle heart
39 chr7:30599400-30603800 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr7:30599400-30603800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr7:30599400-30610000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr7:30599400-30617400 Weak transcription Placenta Amnion Placenta Amnion
43 chr7:30599600-30608000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr7:30599800-30603400 Strong transcription Sigmoid Colon Sigmoid Colon
45 chr7:30599800-30608600 Strong transcription Primary T cells fromperipheralblood blood
46 chr7:30600000-30603800 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr7:30600000-30608600 Strong transcription Fetal Muscle Leg muscle
48 chr7:30600200-30602600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr7:30600200-30603800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr7:30600200-30603800 Strong transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015