The 2.0 version of rSNPBase

Variant report

Variant rs38419
Chromosome Location chr7:30545754-30545755
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30545000-30548800 Weak transcription Placenta Amnion Placenta Amnion
2 chr7:30545000-30584600 Weak transcription Aorta Aorta
3 chr7:30545200-30547600 Weak transcription Thymus Thymus
4 chr7:30545200-30548000 Weak transcription Placenta Placenta
5 chr7:30545200-30548600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr7:30545200-30551600 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr7:30545200-30552000 Weak transcription Gastric stomach
8 chr7:30545200-30556800 Weak transcription Pancreas Pancrea
9 chr7:30545200-30559800 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr7:30545200-30562200 Weak transcription Small Intestine intestine
11 chr7:30545200-30587600 Weak transcription HSMMtube muscle
12 chr7:30545400-30545800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr7:30545400-30545800 Enhancers Dnd41 blood
14 chr7:30545400-30548400 Weak transcription Fetal Intestine Large intestine
15 chr7:30545400-30548600 Weak transcription HMEC breast
16 chr7:30545400-30549400 Weak transcription Fetal Lung lung
17 chr7:30545400-30549400 Weak transcription Stomach Mucosa stomach
18 chr7:30545400-30549600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr7:30545400-30549600 Weak transcription Duodenum Mucosa Duodenum
20 chr7:30545400-30550000 Weak transcription Adipose Nuclei Adipose
21 chr7:30545400-30559600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr7:30545400-30560200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr7:30545400-30560600 Weak transcription Brain Substantia Nigra brain
24 chr7:30545400-30560600 Weak transcription Colon Smooth Muscle Colon
25 chr7:30545400-30576200 Weak transcription Stomach Smooth Muscle stomach
26 chr7:30545400-30576600 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr7:30545600-30545800 Weak transcription Lung lung
28 chr7:30545600-30548600 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr7:30545600-30548600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr7:30545600-30548600 Weak transcription NHEK skin
31 chr7:30545600-30548800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr7:30545600-30549200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr7:30545600-30549400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:30545600-30586200 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015