Variant report
Variant | rs3886071 |
---|---|
Chromosome Location | chr1:90728042-90728043 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10922831 | 0.86[ASN][1000 genomes] |
rs12043844 | 0.84[ASN][1000 genomes] |
rs12043900 | 0.85[ASN][1000 genomes] |
rs12049311 | 0.81[AMR][1000 genomes] |
rs12082931 | 0.86[ASN][1000 genomes] |
rs12083345 | 0.86[ASN][1000 genomes] |
rs28393962 | 0.84[ASN][1000 genomes] |
rs34245845 | 0.84[ASN][1000 genomes] |
rs34311402 | 0.91[AMR][1000 genomes];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs34487333 | 0.86[ASN][1000 genomes] |
rs34493662 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs35288412 | 0.81[ASN][1000 genomes] |
rs4074584 | 0.87[ASN][1000 genomes] |
rs4268341 | 0.86[ASN][1000 genomes] |
rs4453022 | 0.84[ASN][1000 genomes] |
rs4489539 | 0.87[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs4625266 | 0.84[ASN][1000 genomes] |
rs57736521 | 0.82[ASN][1000 genomes] |
rs61770629 | 0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs72954808 | 0.87[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs7528896 | 0.86[ASN][1000 genomes] |
rs7550206 | 0.86[ASN][1000 genomes] |
rs7550989 | 0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv546803 | chr1:90679734-90777717 | Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:90726000-90728200 | Weak transcription | Fetal Lung | lung |