Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10125280	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10217271	0.83[CHB][hapmap]
rs10217669	0.83[CHB][hapmap]
rs10217746	0.83[CHB][hapmap];0.86[CHD][hapmap]
rs11140068	0.83[CHB][hapmap]
rs11140081	0.83[CHB][hapmap];0.86[CHD][hapmap]
rs12000173	0.81[EUR][1000 genomes]
rs12337733	0.83[CHB][hapmap]
rs12339003	0.83[CHB][hapmap];0.81[CHD][hapmap]
rs12340422	0.92[CHB][hapmap]
rs12551179	0.83[CHB][hapmap]
rs17086251	0.83[CHB][hapmap]
rs55825433	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs57018246	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6559720	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7034503	0.96[ASN][1000 genomes]
rs72743085	0.96[ASN][1000 genomes]
rs73463650	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73463659	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73463663	0.87[ASN][1000 genomes]
rs73463664	0.89[ASN][1000 genomes]
rs73465724	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1046491	chr9:85861492-86063992	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:85937400-85998000	Weak transcription	Aorta	Aorta
2	chr9:85942600-85970200	Weak transcription	Psoas Muscle	Psoas
3	chr9:85950200-85976000	Weak transcription	HepG2	liver
4	chr9:85956200-85986600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr9:85958200-85980600	Weak transcription	Left Ventricle	heart
6	chr9:85958200-86007600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr9:85965000-85970000	Weak transcription	Ovary	ovary
8	chr9:85965000-85970200	Weak transcription	Fetal Brain Female	brain
9	chr9:85969800-85971000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr9:85969800-85971000	Enhancers	Fetal Muscle Leg	muscle
11	chr9:85969800-85971000	Enhancers	Fetal Stomach	stomach
12	chr9:85969800-85971200	Enhancers	Fetal Brain Male	brain

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