The 2.0 version of rSNPBase

Variant report

Variant rs3937493
Chromosome Location chr19:21211531-21211532
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:21204200-21224400 Weak transcription Liver Liver
2 chr19:21204200-21230400 Weak transcription Gastric stomach
3 chr19:21204400-21213400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:21204400-21213400 Weak transcription Esophagus oesophagus
5 chr19:21204400-21213800 Weak transcription Psoas Muscle Psoas
6 chr19:21204400-21224000 Weak transcription Aorta Aorta
7 chr19:21204400-21224400 Weak transcription Pancreas Pancrea
8 chr19:21204400-21227200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr19:21204400-21229200 Weak transcription Rectal Smooth Muscle rectum
10 chr19:21204400-21231600 Weak transcription Colonic Mucosa Colon
11 chr19:21204400-21264800 Weak transcription Right Ventricle heart
12 chr19:21204600-21227800 Weak transcription Brain Angular Gyrus brain
13 chr19:21204600-21239800 Weak transcription Colon Smooth Muscle Colon
14 chr19:21205000-21213200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
15 chr19:21205400-21211600 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr19:21205400-21211600 Strong transcription Fetal Intestine Large intestine
17 chr19:21205400-21222800 Weak transcription Fetal Brain Male brain
18 chr19:21205600-21211800 Strong transcription Fetal Muscle Leg muscle
19 chr19:21205600-21219200 Weak transcription Small Intestine intestine
20 chr19:21205800-21213800 Weak transcription Ovary ovary
21 chr19:21205800-21216800 Weak transcription HepG2 liver
22 chr19:21206000-21212000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr19:21206000-21212400 Genic enhancers Primary T helper cells PMA-I stimulated --
24 chr19:21206200-21211800 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr19:21206200-21217000 Weak transcription Fetal Lung lung
26 chr19:21206200-21218000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr19:21206200-21218000 Weak transcription NHLF lung
28 chr19:21206200-21223000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr19:21206200-21223600 Strong transcription Primary hematopoietic stem cells short term culture blood
30 chr19:21206200-21226600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr19:21206200-21241600 Weak transcription H9 Cell Line embryonic stem cell
32 chr19:21206400-21214800 Strong transcription Fetal Thymus thymus
33 chr19:21206400-21220200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr19:21206800-21211600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr19:21206800-21211800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr19:21207200-21212400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr19:21207200-21216800 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr19:21207200-21219200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr19:21207200-21222800 Weak transcription Fetal Kidney kidney
40 chr19:21207200-21239400 Weak transcription Hela-S3 cervix
41 chr19:21207400-21224200 Weak transcription Spleen Spleen
42 chr19:21207400-21226600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr19:21207600-21212000 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr19:21207600-21214400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr19:21207800-21211600 Genic enhancers Primary T helper cells fromperipheralblood blood
46 chr19:21208000-21212000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr19:21208000-21213200 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr19:21208400-21216200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr19:21208400-21216800 Weak transcription NHDF-Ad bronchial
50 chr19:21208600-21211600 Genic enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015