Variant report
| Variant | rs3937768 |
|---|---|
| Chromosome Location | chr8:118593784-118593785 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr8:118578434..118581206-chr8:118592988..118595464,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:32)
| rs_ID | r2[population] |
|---|---|
| rs10091314 | 0.81[AMR][1000 genomes] |
| rs10505295 | 0.87[ASN][1000 genomes] |
| rs10505315 | 0.92[ASN][1000 genomes] |
| rs11992669 | 1.00[JPT][hapmap] |
| rs11997337 | 0.84[ASN][1000 genomes] |
| rs1396347 | 0.84[ASN][1000 genomes] |
| rs16889833 | 1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs16889836 | 1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs16889862 | 0.84[ASN][1000 genomes] |
| rs16889881 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs17667915 | 1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs17668076 | 0.97[ASN][1000 genomes] |
| rs17668088 | 0.97[ASN][1000 genomes] |
| rs17740505 | 1.00[JPT][hapmap];0.87[ASN][1000 genomes] |
| rs17746363 | 0.84[ASN][1000 genomes] |
| rs17746428 | 1.00[CHB][hapmap];0.84[ASN][1000 genomes] |
| rs28571816 | 0.87[ASN][1000 genomes] |
| rs62521200 | 0.87[ASN][1000 genomes] |
| rs62521203 | 0.84[ASN][1000 genomes] |
| rs62521228 | 0.95[ASN][1000 genomes] |
| rs62521229 | 0.95[ASN][1000 genomes] |
| rs62521231 | 0.92[ASN][1000 genomes] |
| rs62521240 | 0.81[ASN][1000 genomes] |
| rs62521243 | 0.84[ASN][1000 genomes] |
| rs62521245 | 0.81[ASN][1000 genomes] |
| rs7003883 | 0.82[AFR][1000 genomes] |
| rs717349 | 1.00[JPT][hapmap];0.84[ASN][1000 genomes] |
| rs72672167 | 0.81[AFR][1000 genomes] |
| rs737298 | 0.81[ASN][1000 genomes] |
| rs749492 | 0.92[ASN][1000 genomes] |
| rs755982 | 0.92[ASN][1000 genomes] |
| rs922587 | 0.97[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:118591600-118615000 | Weak transcription | Aorta | Aorta |
| 2 | chr8:118592200-118594400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
