Variant report

Variant	rs17667915
Chromosome Location	chr8:118544445-118544446
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:118537128..118539334-chr8:118543604..118545763,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10505295	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10505315	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11990107	0.86[EUR][1000 genomes]
rs11992669	1.00[JPT][hapmap]
rs11997337	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16889833	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16889836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.96[TSI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16889862	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17668001	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17668007	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17668076	0.89[ASN][1000 genomes]
rs17668088	0.89[ASN][1000 genomes]
rs17740505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28571816	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3937768	0.87[ASN][1000 genomes]
rs62521183	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62521198	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62521200	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62521203	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62521228	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62521229	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62521231	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs717349	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs749492	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs755982	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs922587	0.84[ASN][1000 genomes]

No data

Chromatin state (count:113 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118533600-118545800	Weak transcription	Esophagus	oesophagus
2	chr8:118533600-118546000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr8:118533600-118546000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr8:118533600-118546400	Weak transcription	Gastric	stomach
5	chr8:118533600-118546400	Weak transcription	Pancreas	Pancrea
6	chr8:118533600-118546400	Weak transcription	Spleen	Spleen
7	chr8:118533800-118545600	Weak transcription	Fetal Intestine Small	intestine
8	chr8:118533800-118545800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr8:118533800-118546400	Weak transcription	Placenta Amnion	Placenta Amnion
10	chr8:118533800-118553800	Weak transcription	Stomach Mucosa	stomach
11	chr8:118534200-118545600	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr8:118534200-118545600	Weak transcription	Colonic Mucosa	Colon
13	chr8:118534200-118545800	Weak transcription	Right Ventricle	heart
14	chr8:118534200-118546000	Weak transcription	HSMMtube	muscle
15	chr8:118534200-118546000	Weak transcription	NH-A	brain
16	chr8:118534400-118545600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr8:118534400-118545600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr8:118534400-118545600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr8:118534400-118545600	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr8:118534400-118545600	Weak transcription	NHEK	skin
21	chr8:118534400-118545800	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr8:118534400-118546000	Weak transcription	Aorta	Aorta
23	chr8:118534400-118546000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr8:118534400-118546000	Weak transcription	Psoas Muscle	Psoas
25	chr8:118534400-118546000	Weak transcription	Rectal Smooth Muscle	rectum
26	chr8:118534400-118546000	Weak transcription	Small Intestine	intestine
27	chr8:118534400-118546000	Weak transcription	HMEC	breast
28	chr8:118534400-118546200	Weak transcription	Cortex derived primary cultured neurospheres	brain
29	chr8:118534400-118557600	Weak transcription	Fetal Brain Male	brain
30	chr8:118534600-118545800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr8:118534800-118545600	Weak transcription	Thymus	Thymus
32	chr8:118534800-118546000	Weak transcription	Fetal Heart	heart
33	chr8:118534800-118546000	Weak transcription	A549	lung
34	chr8:118534800-118546000	Weak transcription	NHLF	lung
35	chr8:118535200-118550400	Weak transcription	K562	blood
36	chr8:118536200-118545800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr8:118536400-118545800	Weak transcription	Fetal Stomach	stomach
38	chr8:118536600-118545600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr8:118537400-118546000	Weak transcription	Brain Substantia Nigra	brain
40	chr8:118538200-118546000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
41	chr8:118538400-118545600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr8:118539600-118545600	Weak transcription	Colon Smooth Muscle	Colon
43	chr8:118540800-118545400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr8:118540800-118546000	Strong transcription	Monocytes-CD14+_RO01746	blood
45	chr8:118541000-118544600	Strong transcription	Primary hematopoietic stem cells	blood
46	chr8:118541000-118545000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr8:118541000-118545000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr8:118541000-118545600	Strong transcription	Primary B cells from cord blood	blood
49	chr8:118541000-118545600	Strong transcription	Primary B cells from peripheral blood	blood
50	chr8:118541000-118545600	Weak transcription	Stomach Smooth Muscle	stomach

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