Variant report

(count:3 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	WRNIP1	chr8:118531293-118531576	GM12878	blood:	n/a	n/a
2	CTCF	chr8:118531465-118531623	MCF-7	breast:	n/a	n/a
3	CTCF	chr8:118531460-118531610	MCF-7	breast:	n/a	n/a

No data

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:118485951..118486834-chr8:118531123..118531762,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EXT1-4	chr8:118531278-118531528	XLOC_007188
2	lnc-EXT1-4	chr8:118531278-118531546	NONHSAT128397

No data

Variant related genes	Relation type
MED30	TF binding region

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10505295	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10505315	0.84[EUR][1000 genomes]
rs11990107	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11997337	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16889833	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16889836	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs16889862	0.87[EUR][1000 genomes]
rs17667915	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17668001	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17668007	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17740505	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28571816	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62521183	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62521200	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62521203	0.87[EUR][1000 genomes]
rs62521228	0.88[EUR][1000 genomes]
rs62521229	0.85[EUR][1000 genomes]
rs62521231	0.84[EUR][1000 genomes]
rs717349	0.87[EUR][1000 genomes]
rs749492	0.84[EUR][1000 genomes]
rs755982	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428525	chr8:118384428-118543349	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv831436	chr8:118384463-118543297	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:118527000-118532000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr8:118531200-118532400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr8:118531400-118532200	Enhancers	Primary T helper cells PMA-I stimulated	--

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