Variant report

Variant	rs4143745
Chromosome Location	chr6:147323074-147323075
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs1112833	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1529015	0.88[ASN][1000 genomes]
rs1529016	0.85[CEU][hapmap];0.86[CHB][hapmap];0.83[CHD][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs4896900	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4896901	0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4896902	0.88[ASN][1000 genomes]
rs6570787	0.88[ASN][1000 genomes]
rs6903137	0.82[EUR][1000 genomes]
rs7740816	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7745042	0.87[CHB][hapmap]
rs7753478	0.86[ASN][1000 genomes]
rs7772651	0.88[CEU][hapmap];0.86[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9390448	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9399593	0.93[ASW][hapmap];0.96[CEU][hapmap];0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[GIH][hapmap];0.95[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147321600-147323200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:147322000-147325000	Weak transcription	Psoas Muscle	Psoas
3	chr6:147322200-147323200	Enhancers	Pancreatic Islets	Pancreatic Islet
4	chr6:147322400-147323200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr6:147322400-147323200	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:147322400-147323400	Enhancers	NHDF-Ad	bronchial
7	chr6:147322600-147323200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:147322600-147323200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr6:147322600-147326400	Weak transcription	Rectal Smooth Muscle	rectum
10	chr6:147322800-147323600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:147322800-147324200	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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