Variant report

Variant	rs7772651
Chromosome Location	chr6:147343938-147343939
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1112833	0.80[ASN][1000 genomes]
rs1529015	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1529016	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4143745	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4896901	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4896902	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6570785	0.80[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6570787	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6909765	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs6910250	0.87[CHB][hapmap]
rs6930740	0.87[CHB][hapmap]
rs7749744	0.87[CHB][hapmap]
rs7753478	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7755338	0.91[CHB][hapmap]
rs9322088	0.86[CHB][hapmap]
rs9399593	0.84[CEU][hapmap];0.82[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:147343800-147364800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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