Variant report

Variant	rs41533551
Chromosome Location	chr1:172475595-172475596
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10218692	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10218821	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12239555	0.87[AFR][1000 genomes]
rs13376238	1.00[ASW][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs16844664	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs16844666	1.00[ASW][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs16844669	0.92[AFR][1000 genomes]
rs2422145	0.92[AFR][1000 genomes]
rs4338394	1.00[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes]
rs4447017	1.00[YRI][hapmap];0.92[AFR][1000 genomes]
rs4500357	0.82[AFR][1000 genomes]
rs6658890	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6659546	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6667977	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:172466800-172476400	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr1:172466800-172477200	Weak transcription	Left Ventricle	heart
3	chr1:172470800-172479200	Weak transcription	Primary neutrophils fromperipheralblood	blood
4	chr1:172474200-172479200	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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