Variant report

Variant rs4500357
Chromosome Location chr1:172501007-172501008
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172498200-172501200 Enhancers Placenta Amnion Placenta Amnion
2 chr1:172499800-172501200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:172500400-172501400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:172500400-172502400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:172500400-172504600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:172500600-172501200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr1:172500600-172501200 Flanking Active TSS Muscle Satellite Cultured Cells --
8 chr1:172500600-172501200 Flanking Active TSS Brain Substantia Nigra brain
9 chr1:172500600-172501200 Flanking Active TSS Fetal Kidney kidney
10 chr1:172500600-172501200 Flanking Active TSS Hela-S3 cervix
11 chr1:172500600-172501200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
12 chr1:172500600-172501200 Flanking Active TSS NHEK skin
13 chr1:172500600-172501400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
14 chr1:172500600-172501400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
15 chr1:172500600-172501400 Flanking Active TSS Primary B cells from cord blood blood
16 chr1:172500600-172501400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:172500600-172501400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:172500600-172503200 Active TSS Fetal Thymus thymus
19 chr1:172500600-172503400 Active TSS Thymus Thymus
20 chr1:172500600-172503600 Active TSS A549 lung
21 chr1:172500600-172503800 Active TSS HUES48 Cell Line embryonic stem cell
22 chr1:172500600-172504200 Active TSS HUES64 Cell Line embryonic stem cell
23 chr1:172500600-172504200 Active TSS NHDF-Ad bronchial
24 chr1:172500800-172501200 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:172500800-172501200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
26 chr1:172500800-172501200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:172500800-172501200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
28 chr1:172500800-172501200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
29 chr1:172500800-172501200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
30 chr1:172500800-172501200 Flanking Active TSS Adipose Nuclei Adipose
31 chr1:172500800-172501200 Flanking Active TSS Liver Liver
32 chr1:172500800-172501200 Flanking Active TSS Brain Anterior Caudate brain
33 chr1:172500800-172501200 Flanking Active TSS Brain Hippocampus Middle brain
34 chr1:172500800-172501200 Flanking Active TSS Brain Inferior Temporal Lobe brain
35 chr1:172500800-172501200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
36 chr1:172500800-172501200 Flanking Active TSS Fetal Heart heart
37 chr1:172500800-172501200 Flanking Active TSS Dnd41 blood
38 chr1:172500800-172501400 Flanking Active TSS Primary T cells from cord blood blood
39 chr1:172500800-172501400 Flanking Active TSS Primary hematopoietic stem cells blood
40 chr1:172500800-172501400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
41 chr1:172500800-172501400 Flanking Active TSS Brain Angular Gyrus brain
42 chr1:172500800-172501600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
43 chr1:172500800-172502000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
44 chr1:172500800-172502200 Active TSS Primary T helper naive cells fromperipheralblood blood
45 chr1:172500800-172502200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:172500800-172503000 Active TSS Primary Natural Killer cells fromperipheralblood blood
47 chr1:172500800-172503200 Active TSS Primary T helper naive cells from peripheral blood blood
48 chr1:172500800-172503200 Active TSS Fetal Muscle Leg muscle
49 chr1:172500800-172503400 Active TSS Primary T cells fromperipheralblood blood
50 chr1:172500800-172503400 Active TSS Aorta Aorta

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