Variant report

Variant	rs4236944
Chromosome Location	chr8:66672434-66672435
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66671072..66672939-chr8:66945232..66947394,2	MCF-7	breast:
2	chr8:66665862..66667938-chr8:66670976..66673867,2	MCF-7	breast:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10088623	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10096256	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10216810	0.89[ASN][1000 genomes]
rs1122353	0.89[ASN][1000 genomes]
rs1122354	0.87[ASN][1000 genomes]
rs11991758	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12542226	0.89[ASN][1000 genomes]
rs12677891	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12678193	0.86[ASN][1000 genomes]
rs12680705	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1877641	0.89[ASN][1000 genomes]
rs60589458	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs999305	0.81[ASN][1000 genomes]

No data

Chromatin state (count:106 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66621400-66673000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:66635200-66674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr8:66635400-66673600	Weak transcription	Brain Substantia Nigra	brain
4	chr8:66635400-66673800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr8:66635400-66674000	Weak transcription	Fetal Brain Male	brain
6	chr8:66645600-66686000	Weak transcription	HSMM	muscle
7	chr8:66647600-66673400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
10	chr8:66649600-66683800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr8:66651000-66673600	Weak transcription	Brain Hippocampus Middle	brain
12	chr8:66651000-66676600	Weak transcription	Fetal Lung	lung
13	chr8:66651200-66673600	Weak transcription	Placenta	Placenta
14	chr8:66651400-66673800	Weak transcription	NHLF	lung
15	chr8:66651600-66672800	Weak transcription	Hela-S3	cervix
16	chr8:66651600-66673000	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr8:66651600-66679400	Weak transcription	Rectal Mucosa Donor 29	rectum
18	chr8:66651600-66690200	Weak transcription	NH-A	brain
19	chr8:66651800-66673800	Weak transcription	A549	lung
20	chr8:66654600-66690200	Weak transcription	Lung	lung
21	chr8:66655800-66674000	Weak transcription	Aorta	Aorta
22	chr8:66656400-66687800	Weak transcription	Pancreas	Pancrea
23	chr8:66657000-66685000	Weak transcription	Fetal Intestine Large	intestine
24	chr8:66658600-66686000	Weak transcription	Fetal Muscle Trunk	muscle
25	chr8:66658600-66687800	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr8:66659800-66673000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr8:66659800-66674400	Weak transcription	NHEK	skin
28	chr8:66659800-66687400	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr8:66660000-66673800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr8:66660000-66673800	Weak transcription	HMEC	breast
31	chr8:66660000-66679400	Weak transcription	HUES6 Cell Line	embryonic stem cell
32	chr8:66660400-66681600	Weak transcription	HUES48 Cell Line	embryonic stem cell
33	chr8:66662800-66690200	Weak transcription	HepG2	liver
34	chr8:66664600-66674000	Weak transcription	Osteobl	bone
35	chr8:66665400-66687800	Strong transcription	Fetal Thymus	thymus
36	chr8:66666600-66674000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
37	chr8:66667400-66687800	Strong transcription	Dnd41	blood
38	chr8:66667800-66673800	Strong transcription	Primary B cells from peripheral blood	blood
39	chr8:66668000-66673000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
40	chr8:66668200-66682600	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr8:66668200-66686200	Weak transcription	Liver	Liver
42	chr8:66668400-66680000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
43	chr8:66668600-66673000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr8:66668600-66673000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
45	chr8:66668600-66673600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr8:66668600-66685600	Weak transcription	Adipose Nuclei	Adipose
47	chr8:66668800-66674000	Strong transcription	Primary T cells from cord blood	blood
48	chr8:66669000-66679800	Weak transcription	Spleen	Spleen
49	chr8:66669200-66673200	Strong transcription	Thymus	Thymus
50	chr8:66669200-66673800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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