Variant report

Variant	rs10216810
Chromosome Location	chr8:66670613-66670614
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10087361	0.88[CEU][hapmap]
rs10088623	0.91[CHB][hapmap];0.82[JPT][hapmap];0.91[ASN][1000 genomes]
rs10096256	0.91[ASN][1000 genomes]
rs1122353	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1122354	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11990855	0.88[CEU][hapmap]
rs11991758	0.91[CHB][hapmap];0.82[JPT][hapmap];0.91[YRI][hapmap];0.91[ASN][1000 genomes]
rs12542226	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12544767	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12677419	0.82[EUR][1000 genomes]
rs12677891	0.91[CHB][hapmap];0.82[JPT][hapmap];0.89[ASN][1000 genomes]
rs12678193	0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs12678467	0.88[CEU][hapmap];0.82[EUR][1000 genomes]
rs12680705	0.91[CHB][hapmap];0.82[JPT][hapmap];0.91[YRI][hapmap];0.91[ASN][1000 genomes]
rs1473601	0.88[CEU][hapmap]
rs16932340	1.00[YRI][hapmap]
rs1877638	0.82[EUR][1000 genomes]
rs1877641	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2102648	0.88[CEU][hapmap]
rs2175809	0.82[EUR][1000 genomes]
rs28576524	0.88[CEU][hapmap];0.81[EUR][1000 genomes]
rs4236944	0.89[ASN][1000 genomes]
rs60589458	0.91[ASN][1000 genomes]
rs7016472	0.88[CEU][hapmap]

No data

Chromatin state (count:103 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66621400-66673000	Weak transcription	Colon Smooth Muscle	Colon
2	chr8:66635200-66674000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr8:66635400-66673600	Weak transcription	Brain Substantia Nigra	brain
4	chr8:66635400-66673800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr8:66635400-66674000	Weak transcription	Fetal Brain Male	brain
6	chr8:66645600-66686000	Weak transcription	HSMM	muscle
7	chr8:66647600-66670800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr8:66647600-66673400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr8:66647800-66695200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr8:66649000-66690200	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr8:66649600-66683800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
12	chr8:66650000-66671400	Weak transcription	Right Ventricle	heart
13	chr8:66651000-66671600	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr8:66651000-66673600	Weak transcription	Brain Hippocampus Middle	brain
15	chr8:66651000-66676600	Weak transcription	Fetal Lung	lung
16	chr8:66651200-66673600	Weak transcription	Placenta	Placenta
17	chr8:66651400-66673800	Weak transcription	NHLF	lung
18	chr8:66651600-66671000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr8:66651600-66671000	Weak transcription	Fetal Stomach	stomach
20	chr8:66651600-66671200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr8:66651600-66672800	Weak transcription	Hela-S3	cervix
22	chr8:66651600-66673000	Weak transcription	Duodenum Smooth Muscle	Duodenum
23	chr8:66651600-66679400	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr8:66651600-66690200	Weak transcription	NH-A	brain
25	chr8:66651800-66673800	Weak transcription	A549	lung
26	chr8:66654600-66690200	Weak transcription	Lung	lung
27	chr8:66655800-66671600	Weak transcription	Esophagus	oesophagus
28	chr8:66655800-66674000	Weak transcription	Aorta	Aorta
29	chr8:66656400-66687800	Weak transcription	Pancreas	Pancrea
30	chr8:66657000-66671000	Weak transcription	Right Atrium	heart
31	chr8:66657000-66685000	Weak transcription	Fetal Intestine Large	intestine
32	chr8:66658600-66686000	Weak transcription	Fetal Muscle Trunk	muscle
33	chr8:66658600-66687800	Weak transcription	H1 Cell Line	embryonic stem cell
34	chr8:66659800-66673000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr8:66659800-66674400	Weak transcription	NHEK	skin
36	chr8:66659800-66687400	Weak transcription	Primary neutrophils fromperipheralblood	blood
37	chr8:66660000-66670800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr8:66660000-66673800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr8:66660000-66673800	Weak transcription	HMEC	breast
40	chr8:66660000-66679400	Weak transcription	HUES6 Cell Line	embryonic stem cell
41	chr8:66660200-66671000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr8:66660400-66671400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
43	chr8:66660400-66681600	Weak transcription	HUES48 Cell Line	embryonic stem cell
44	chr8:66661400-66670800	Weak transcription	Gastric	stomach
45	chr8:66662800-66690200	Weak transcription	HepG2	liver
46	chr8:66664600-66674000	Weak transcription	Osteobl	bone
47	chr8:66665400-66687800	Strong transcription	Fetal Thymus	thymus
48	chr8:66666400-66670800	Weak transcription	Primary monocytes fromperipheralblood	blood
49	chr8:66666600-66670800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
50	chr8:66666600-66671000	Weak transcription	Left Ventricle	heart

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