Variant report
| Variant | rs4288089 |
|---|---|
| Chromosome Location | chr5:53995448-53995449 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:53987400-53999600 | Weak transcription | Pancreas | Pancrea |
| 2 | chr5:53987600-53997800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 3 | chr5:53990000-53999000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr5:53990600-53999000 | Weak transcription | Right Ventricle | heart |
| 5 | chr5:53990800-53998800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr5:53992600-53998400 | Weak transcription | Brain Hippocampus Middle | brain |
| 7 | chr5:53992800-53997000 | Weak transcription | Adipose Nuclei | Adipose |
| 8 | chr5:53992800-53997800 | Enhancers | HSMMtube | muscle |
| 9 | chr5:53993000-53996600 | Weak transcription | Osteobl | bone |
| 10 | chr5:53993000-53997000 | Weak transcription | Ovary | ovary |
| 11 | chr5:53993000-53997600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 12 | chr5:53993000-53998400 | Weak transcription | Brain Substantia Nigra | brain |
| 13 | chr5:53993000-53999000 | Weak transcription | Placenta | Placenta |
| 14 | chr5:53993200-53995800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 15 | chr5:53993200-53996600 | Weak transcription | Fetal Brain Female | brain |
| 16 | chr5:53993200-53997200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 17 | chr5:53993200-53998200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 18 | chr5:53993200-53998400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr5:53993200-53998600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 20 | chr5:53993400-53998200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 21 | chr5:53993400-53998600 | Weak transcription | Fetal Muscle Leg | muscle |
| 22 | chr5:53993800-53996000 | Enhancers | Aorta | Aorta |
| 23 | chr5:53993800-53996600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 24 | chr5:53993800-53998200 | Weak transcription | Colon Smooth Muscle | Colon |
| 25 | chr5:53994000-53997800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 26 | chr5:53994000-53998800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 27 | chr5:53994000-53999000 | Weak transcription | Fetal Brain Male | brain |
| 28 | chr5:53994200-53998800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 29 | chr5:53994400-53997800 | Enhancers | HSMM | muscle |
| 30 | chr5:53994600-53996000 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 31 | chr5:53994600-53996800 | Weak transcription | Fetal Heart | heart |
| 32 | chr5:53994600-53999000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 33 | chr5:53994800-53996000 | Enhancers | Left Ventricle | heart |
| 34 | chr5:53994800-53997400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 35 | chr5:53995000-53997000 | Weak transcription | Fetal Stomach | stomach |
| 36 | chr5:53995000-53998400 | Enhancers | NH-A | brain |
| 37 | chr5:53995200-53996200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 38 | chr5:53995200-53996800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr5:53995200-53997200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 40 | chr5:53995200-53998200 | Weak transcription | Fetal Lung | lung |
| 41 | chr5:53995400-53996400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr5:53995400-53996600 | Weak transcription | NHDF-Ad | bronchial |
| 43 | chr5:53995400-53996600 | Weak transcription | NHLF | lung |
