Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10012945	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs10520255	0.86[CHB][hapmap]
rs11725185	0.89[EUR][1000 genomes]
rs11725544	0.87[EUR][1000 genomes]
rs11728445	0.89[EUR][1000 genomes]
rs11737666	0.91[EUR][1000 genomes]
rs11737713	0.91[EUR][1000 genomes]
rs13120298	0.91[EUR][1000 genomes]
rs13121054	0.87[EUR][1000 genomes]
rs13125078	0.91[EUR][1000 genomes]
rs13138296	0.89[EUR][1000 genomes]
rs13147948	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs13151627	0.86[CHB][hapmap]
rs17059153	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs17059154	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs17059159	0.92[ASN][1000 genomes]
rs17255483	0.82[CEU][hapmap]
rs28709360	0.91[EUR][1000 genomes]
rs28735865	0.89[EUR][1000 genomes]
rs34155242	0.89[EUR][1000 genomes]
rs34215795	0.90[EUR][1000 genomes]
rs3966013	0.93[CEU][hapmap];0.89[EUR][1000 genomes]
rs60568577	0.91[EUR][1000 genomes]
rs62341067	0.91[EUR][1000 genomes]
rs62341069	0.89[EUR][1000 genomes]
rs71609810	0.89[EUR][1000 genomes]
rs7669036	0.98[ASN][1000 genomes]
rs7679498	0.91[EUR][1000 genomes]
rs7683542	0.96[ASN][1000 genomes]
rs9991061	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174016200-174027800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr4:174021800-174027400	Weak transcription	HUES64 Cell Line	embryonic stem cell

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