The 2.0 version of rSNPBase

Variant report

Variant rs4360865
Chromosome Location chr15:49403588-49403589
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49386400-49404200 Weak transcription Brain Inferior Temporal Lobe brain
2 chr15:49387400-49404200 Weak transcription Placenta Amnion Placenta Amnion
3 chr15:49388800-49404400 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr15:49388800-49404600 Weak transcription Hela-S3 cervix
5 chr15:49388800-49418800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr15:49388800-49434800 Weak transcription Small Intestine intestine
7 chr15:49389600-49404400 Weak transcription HepG2 liver
8 chr15:49391400-49404200 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr15:49393600-49404200 Weak transcription Brain Anterior Caudate brain
10 chr15:49393600-49404200 Weak transcription Brain Substantia Nigra brain
11 chr15:49393600-49413200 Weak transcription HMEC breast
12 chr15:49394000-49404600 Weak transcription Brain Cingulate Gyrus brain
13 chr15:49395400-49419000 Weak transcription Fetal Kidney kidney
14 chr15:49395600-49426400 Weak transcription Rectal Smooth Muscle rectum
15 chr15:49395800-49404200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr15:49395800-49404400 Strong transcription Liver Liver
17 chr15:49396000-49419600 Weak transcription NHEK skin
18 chr15:49396400-49418800 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr15:49396600-49404200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr15:49396800-49404200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr15:49398200-49404600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr15:49398400-49404200 Weak transcription K562 blood
23 chr15:49398400-49404600 Weak transcription HSMMtube muscle
24 chr15:49398600-49403600 Weak transcription Primary T cells fromperipheralblood blood
25 chr15:49398600-49403800 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr15:49398600-49404200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr15:49398600-49427600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr15:49399200-49403600 Weak transcription NH-A brain
29 chr15:49399200-49404200 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr15:49399200-49414600 Weak transcription HUVEC blood vessel
31 chr15:49400000-49403600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr15:49400000-49404200 Strong transcription HSMM muscle
33 chr15:49400000-49404400 Weak transcription Brain Angular Gyrus brain
34 chr15:49401200-49404200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr15:49401600-49404200 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr15:49401800-49404200 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr15:49401800-49404200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr15:49401800-49405000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr15:49402200-49403800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr15:49402200-49404200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr15:49402200-49404200 Strong transcription Primary B cells from cord blood blood
42 chr15:49402200-49404200 Weak transcription Fetal Lung lung
43 chr15:49402400-49403600 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr15:49402400-49403600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr15:49402400-49403600 Strong transcription Esophagus oesophagus
46 chr15:49402400-49403600 Strong transcription Fetal Adrenal Gland Adrenal Gland
47 chr15:49402400-49403600 Strong transcription Fetal Intestine Small intestine
48 chr15:49402400-49403600 ZNF genes & repeats Spleen Spleen
49 chr15:49402400-49403800 Strong transcription Primary B cells from peripheral blood blood
50 chr15:49402400-49403800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015