The 2.0 version of rSNPBase

Variant report

Variant rs2289391
Chromosome Location chr15:49423121-49423122
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49388800-49434800 Weak transcription Small Intestine intestine
2 chr15:49395600-49426400 Weak transcription Rectal Smooth Muscle rectum
3 chr15:49398600-49427600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr15:49403000-49434600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr15:49403200-49423400 Weak transcription Psoas Muscle Psoas
6 chr15:49403400-49440200 Weak transcription Pancreas Pancrea
7 chr15:49403600-49423600 Weak transcription Esophagus oesophagus
8 chr15:49403600-49432200 Weak transcription Fetal Stomach stomach
9 chr15:49403600-49435200 Weak transcription Aorta Aorta
10 chr15:49403600-49435200 Weak transcription Gastric stomach
11 chr15:49403600-49435400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr15:49403800-49433200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr15:49404600-49424000 Weak transcription Placenta Amnion Placenta Amnion
14 chr15:49404800-49423400 Weak transcription HepG2 liver
15 chr15:49404800-49425600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr15:49404800-49434600 Weak transcription Right Ventricle heart
17 chr15:49404800-49435000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr15:49405600-49441800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr15:49411400-49432200 Weak transcription Fetal Intestine Small intestine
20 chr15:49413000-49427200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:49413400-49426200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr15:49413600-49447000 Weak transcription Stomach Mucosa stomach
23 chr15:49414000-49426400 Strong transcription HSMM muscle
24 chr15:49415200-49423600 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr15:49415200-49433400 Weak transcription Lung lung
26 chr15:49415400-49427400 Strong transcription Hela-S3 cervix
27 chr15:49415400-49427600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr15:49415600-49427400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr15:49415600-49437600 Strong transcription Primary monocytes fromperipheralblood blood
30 chr15:49415800-49437400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr15:49416200-49427600 Weak transcription Fetal Brain Male brain
32 chr15:49416200-49437400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr15:49416400-49427800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr15:49416800-49423600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr15:49416800-49436800 Strong transcription Liver Liver
36 chr15:49416800-49437200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr15:49417000-49437200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr15:49417200-49424400 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr15:49417200-49424800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr15:49417200-49426600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr15:49417200-49436600 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr15:49417200-49437200 Strong transcription HUES48 Cell Line embryonic stem cell
43 chr15:49417200-49437200 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr15:49417200-49437400 Strong transcription iPS-20b Cell Line embryonic stem cell
45 chr15:49417200-49437400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr15:49417400-49427600 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr15:49417400-49427600 Strong transcription Placenta Placenta
48 chr15:49417400-49437200 Strong transcription Primary T regulatory cells fromperipheralblood blood
49 chr15:49417600-49437200 Strong transcription Breast Myoepithelial Primary Cells Breast
50 chr15:49417600-49437200 Strong transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015