The 2.0 version of rSNPBase

Variant report

Variant rs57560518
Chromosome Location chr15:49510957-49510958
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:49463600-49517600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr15:49463600-49527800 Weak transcription HSMM muscle
3 chr15:49463600-49540200 Weak transcription Colonic Mucosa Colon
4 chr15:49484200-49519400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr15:49487200-49531200 Weak transcription HMEC breast
6 chr15:49492000-49517600 Weak transcription NHLF lung
7 chr15:49492000-49520000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr15:49492000-49527800 Weak transcription Rectal Smooth Muscle rectum
9 chr15:49492000-49530200 Weak transcription Stomach Smooth Muscle stomach
10 chr15:49492000-49539400 Weak transcription Small Intestine intestine
11 chr15:49492200-49512800 Weak transcription NHDF-Ad bronchial
12 chr15:49492800-49514600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr15:49493000-49520000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr15:49494000-49518600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr15:49495000-49515600 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr15:49495000-49515800 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr15:49495000-49518000 Weak transcription Placenta Placenta
18 chr15:49495200-49520200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:49496000-49512400 Weak transcription HUVEC blood vessel
20 chr15:49503200-49511000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr15:49503400-49511000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr15:49503600-49524000 Weak transcription HepG2 liver
23 chr15:49504000-49511000 Weak transcription Aorta Aorta
24 chr15:49504000-49512400 Weak transcription Fetal Brain Female brain
25 chr15:49504200-49513000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr15:49504200-49513800 Weak transcription Fetal Lung lung
27 chr15:49504200-49520200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr15:49504200-49530800 Weak transcription Fetal Thymus thymus
29 chr15:49506400-49513600 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr15:49507200-49517400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr15:49507400-49515600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr15:49508200-49511000 Strong transcription Primary monocytes fromperipheralblood blood
33 chr15:49508400-49511400 Strong transcription Duodenum Mucosa Duodenum
34 chr15:49508400-49512600 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr15:49508600-49515600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr15:49508600-49517400 Weak transcription Right Ventricle heart
37 chr15:49508800-49511000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
38 chr15:49508800-49515000 Weak transcription Fetal Muscle Trunk muscle
39 chr15:49508800-49515800 Weak transcription Psoas Muscle Psoas
40 chr15:49508800-49517400 Weak transcription Esophagus oesophagus
41 chr15:49508800-49517600 Weak transcription Spleen Spleen
42 chr15:49508800-49521600 Weak transcription Hela-S3 cervix
43 chr15:49508800-49535800 Weak transcription A549 lung
44 chr15:49509000-49511000 Weak transcription Fetal Intestine Small intestine
45 chr15:49509000-49511000 Weak transcription Fetal Stomach stomach
46 chr15:49509000-49511000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr15:49509000-49512800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr15:49509000-49513600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr15:49509000-49517400 Weak transcription Primary T cells fromperipheralblood blood
50 chr15:49509000-49517400 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015