Variant report

Variant	rs7174269
Chromosome Location	chr15:49381192-49381193
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10519211	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1114003	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962065	1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs16962067	1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs16962101	1.00[JPT][hapmap]
rs16962112	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs16962139	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs16962146	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs16962147	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs16962166	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962169	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962171	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962174	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962175	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962177	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962187	1.00[CEU][hapmap];0.90[YRI][hapmap];0.81[ASN][1000 genomes]
rs16962189	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962196	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962202	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962205	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962209	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962211	1.00[CEU][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962213	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs16962235	1.00[JPT][hapmap]
rs16962236	1.00[JPT][hapmap]
rs16962237	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]
rs16962238	1.00[JPT][hapmap]
rs16962244	1.00[JPT][hapmap]
rs16962256	1.00[JPT][hapmap]
rs16962259	1.00[JPT][hapmap]
rs16962262	1.00[JPT][hapmap]
rs16962273	1.00[JPT][hapmap]
rs16962274	1.00[JPT][hapmap]
rs16962276	1.00[CEU][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs16962288	1.00[JPT][hapmap]
rs17396612	1.00[JPT][hapmap]
rs17426226	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2127243	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2169931	1.00[JPT][hapmap]
rs2289391	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2413934	1.00[ASN][1000 genomes]
rs3959659	0.81[ASN][1000 genomes]
rs4360865	1.00[ASN][1000 genomes]
rs6493354	0.81[ASN][1000 genomes]
rs7168633	1.00[JPT][hapmap]
rs7173759	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]
rs7175494	0.92[YRI][hapmap]
rs7176949	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs7179094	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7179393	1.00[ASN][1000 genomes]
rs7179907	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs7181656	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7182449	0.87[ASN][1000 genomes]
rs7183899	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs73408130	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8025550	1.00[JPT][hapmap]
rs8028746	1.00[CEU][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];1.00[EUR][1000 genomes]
rs8029506	1.00[JPT][hapmap]
rs8033861	1.00[ASN][1000 genomes]
rs8034427	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8035170	1.00[ASN][1000 genomes]
rs8035829	1.00[CEU][hapmap];1.00[JPT][hapmap];0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs8035901	0.81[ASN][1000 genomes]
rs8039469	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8040795	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:49376200-49395200	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr15:49376400-49397800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr15:49376600-49391600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr15:49376600-49397600	Weak transcription	NHLF	lung
5	chr15:49378400-49385000	Weak transcription	Placenta	Placenta
6	chr15:49378600-49381600	Enhancers	Brain Hippocampus Middle	brain
7	chr15:49378800-49381200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr15:49378800-49396800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr15:49380000-49381600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr15:49380400-49381800	Enhancers	Brain Substantia Nigra	brain
11	chr15:49380400-49382200	Enhancers	Brain Anterior Caudate	brain
12	chr15:49380400-49382400	Enhancers	Brain Cingulate Gyrus	brain
13	chr15:49380600-49381400	Enhancers	Brain Angular Gyrus	brain
14	chr15:49380600-49381600	Enhancers	Brain Inferior Temporal Lobe	brain
15	chr15:49380600-49382400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr15:49381000-49381600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
17	chr15:49381000-49382600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin

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