Variant report

Variant rs4376880
Chromosome Location chr11:36371492-36371493
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:36364400-36381800 Weak transcription Brain Angular Gyrus brain
2 chr11:36365200-36374000 Weak transcription Brain Hippocampus Middle brain
3 chr11:36365200-36374200 Weak transcription Brain Substantia Nigra brain
4 chr11:36367000-36375800 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr11:36367400-36371800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr11:36367400-36375200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr11:36367400-36375600 Weak transcription Placenta Amnion Placenta Amnion
8 chr11:36367400-36375800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr11:36367400-36381200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr11:36367600-36375800 Weak transcription Duodenum Mucosa Duodenum
11 chr11:36367800-36375800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:36369400-36371800 Weak transcription Gastric stomach
13 chr11:36369400-36374200 Weak transcription GM12878-XiMat blood
14 chr11:36369600-36375400 Weak transcription Fetal Intestine Small intestine
15 chr11:36370800-36371600 Enhancers Cortex derived primary cultured neurospheres brain
16 chr11:36371000-36371600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr11:36371000-36372000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:36371000-36372000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr11:36371000-36372000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr11:36371000-36372000 Enhancers Adipose Nuclei Adipose
21 chr11:36371000-36372000 Enhancers HUVEC blood vessel
22 chr11:36371200-36371600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr11:36371200-36371600 Enhancers HUES64 Cell Line embryonic stem cell
24 chr11:36371200-36371600 Enhancers Brain Anterior Caudate brain
25 chr11:36371200-36371600 Enhancers Fetal Intestine Large intestine
26 chr11:36371400-36371600 Enhancers iPS-20b Cell Line embryonic stem cell
27 chr11:36371400-36374000 Weak transcription Brain Cingulate Gyrus brain
28 chr11:36371400-36376200 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr11:36371400-36376600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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