Variant report

Variant	rs4381280
Chromosome Location	chr10:23378237-23378238
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11013286	0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11815995	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12414753	0.81[AMR][1000 genomes]
rs12415049	0.97[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1555803	0.91[AMR][1000 genomes]
rs1555804	0.86[AMR][1000 genomes]
rs16923009	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs16923022	0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs16923031	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs28787441	0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7067788	0.97[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7909957	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7916862	0.91[AMR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23366400-23383600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:23369200-23383800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr10:23371000-23383800	Weak transcription	Fetal Heart	heart
4	chr10:23376600-23378600	Enhancers	Hela-S3	cervix

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links