Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10775473	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11082279	0.90[EUR][1000 genomes]
rs11082280	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12373388	0.93[EUR][1000 genomes]
rs12457109	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12953789	0.92[EUR][1000 genomes]
rs12954824	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4243262	0.80[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4257289	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4274502	0.91[EUR][1000 genomes]
rs4350653	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4350654	0.93[EUR][1000 genomes]
rs4890405	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7227825	0.85[EUR][1000 genomes]
rs7228101	0.97[ASN][1000 genomes]
rs7228153	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7230640	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7231626	0.99[ASN][1000 genomes]
rs7237838	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7238529	0.80[AFR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8085968	0.91[EUR][1000 genomes]
rs9945841	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9964460	0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3447158	chr18:40045478-40320720	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3'	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv2754458	chr18:40070202-40164902	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:40139200-40139800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr18:40139400-40139800	Enhancers	Muscle Satellite Cultured Cells	--
3	chr18:40139400-40140200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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