Variant report

Variant	rs4407801
Chromosome Location	chr7:103598061-103598062
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs12705172	0.87[JPT][hapmap];0.88[ASN][1000 genomes]
rs35947606	1.00[ASN][1000 genomes]
rs4727580	0.85[CEU][hapmap];0.89[EUR][1000 genomes]
rs4727581	0.84[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4727582	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4727583	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6943822	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs722277	0.96[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs722278	0.96[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7809970	0.81[CEU][hapmap]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103596000-103599000	Strong transcription	HepG2	liver
2	chr7:103596600-103598200	Enhancers	Fetal Heart	heart
3	chr7:103597200-103599000	Strong transcription	K562	blood
4	chr7:103598000-103598200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr7:103598000-103598200	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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