Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10055234	0.87[ASN][1000 genomes]
rs10065453	0.87[ASN][1000 genomes]
rs10078174	0.87[ASN][1000 genomes]
rs12153594	1.00[CEU][hapmap]
rs12522268	1.00[CEU][hapmap]
rs12658641	0.85[EUR][1000 genomes]
rs13353833	0.87[ASN][1000 genomes]
rs1366309	0.87[ASN][1000 genomes]
rs1428310	1.00[CEU][hapmap]
rs1428313	1.00[CEU][hapmap];0.87[ASN][1000 genomes]
rs1428319	1.00[CEU][hapmap]
rs1428320	1.00[CEU][hapmap];0.87[ASN][1000 genomes]
rs1428322	1.00[CEU][hapmap];0.81[ASN][1000 genomes]
rs1428344	1.00[CEU][hapmap]
rs2052839	1.00[CEU][hapmap]
rs2925527	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2972785	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2972792	0.85[AFR][1000 genomes]
rs2972793	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4315931	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4352612	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4365853	1.00[EUR][1000 genomes]
rs4493688	0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4867210	1.00[CEU][hapmap];0.87[ASN][1000 genomes]
rs5025815	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6450723	0.87[ASN][1000 genomes]
rs6450725	0.87[ASN][1000 genomes]
rs7723603	1.00[CEU][hapmap];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016603	chr5:29102713-29843965	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
2	nsv537712	chr5:29102713-29843965	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	43 gene(s)	inside rSNPs	diseases
3	esv3385368	chr5:29548608-29910057	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:29827800-29832800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr5:29829200-29830000	Enhancers	Fetal Lung	lung

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