The 2.0 version of rSNPBase

Variant report

Variant rs4427415
Chromosome Location chr1:95493261-95493262
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95480000-95508800 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr1:95484600-95495000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:95484800-95494600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:95485000-95500400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:95485200-95507000 Weak transcription Fetal Heart heart
6 chr1:95486600-95494600 Weak transcription HepG2 liver
7 chr1:95487400-95494600 Weak transcription Esophagus oesophagus
8 chr1:95488000-95507000 Weak transcription Ovary ovary
9 chr1:95488200-95499400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:95488200-95505400 Weak transcription Pancreas Pancrea
11 chr1:95488200-95507000 Weak transcription Rectal Smooth Muscle rectum
12 chr1:95488200-95537600 Weak transcription Right Ventricle heart
13 chr1:95488400-95494200 Weak transcription Brain Anterior Caudate brain
14 chr1:95488400-95494800 Weak transcription Stomach Smooth Muscle stomach
15 chr1:95488400-95507000 Weak transcription Brain Angular Gyrus brain
16 chr1:95488400-95507800 Weak transcription Brain Substantia Nigra brain
17 chr1:95488600-95493600 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:95488600-95507800 Weak transcription Colon Smooth Muscle Colon
19 chr1:95488800-95494400 Weak transcription Primary B cells from peripheral blood blood
20 chr1:95488800-95505400 Weak transcription Small Intestine intestine
21 chr1:95489400-95517200 Weak transcription Aorta Aorta
22 chr1:95489800-95494200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:95489800-95499600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:95490000-95494600 Weak transcription NHEK skin
25 chr1:95490200-95494600 Weak transcription GM12878-XiMat blood
26 chr1:95490600-95493400 Strong transcription Liver Liver
27 chr1:95491200-95494400 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr1:95491400-95493400 Weak transcription Fetal Brain Female brain
29 chr1:95491400-95494400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:95491400-95494400 Weak transcription Adipose Nuclei Adipose
31 chr1:95491400-95494400 Weak transcription Thymus Thymus
32 chr1:95491400-95494600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr1:95491400-95494600 Weak transcription Brain Germinal Matrix brain
34 chr1:95491400-95494600 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:95491400-95494600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr1:95491400-95495200 Weak transcription Primary B cells from cord blood blood
37 chr1:95491400-95503600 Weak transcription Primary T helper cells PMA-I stimulated --
38 chr1:95491400-95507000 Weak transcription Fetal Kidney kidney
39 chr1:95491600-95494600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:95491600-95496200 Weak transcription Left Ventricle heart
41 chr1:95491600-95529600 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:95491800-95494600 Weak transcription Psoas Muscle Psoas
43 chr1:95492000-95493400 Enhancers NHLF lung
44 chr1:95492200-95493800 Enhancers HSMM muscle
45 chr1:95492200-95494200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:95492400-95493400 Enhancers Muscle Satellite Cultured Cells --
47 chr1:95492400-95493400 Enhancers NH-A brain
48 chr1:95492400-95493400 Enhancers Osteobl bone
49 chr1:95492400-95493600 Enhancers HUVEC blood vessel
50 chr1:95492400-95493800 Enhancers HSMMtube muscle

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Last update: Aug 31, 2015