The 2.0 version of rSNPBase

Variant report

Variant rs4436402
Chromosome Location chr1:93456186-93456187
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93451800-93466000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:93452400-93458600 Weak transcription HSMMtube muscle
3 chr1:93453800-93456200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
4 chr1:93454400-93458800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr1:93454600-93458000 Enhancers Primary Natural Killer cells fromperipheralblood blood
6 chr1:93454600-93458200 Enhancers Primary T helper 17 cells PMA-I stimulated --
7 chr1:93454600-93458400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
8 chr1:93454600-93458800 Enhancers Primary T cells fromperipheralblood blood
9 chr1:93454600-93459800 Enhancers Primary T cells from cord blood blood
10 chr1:93454600-93459800 Enhancers Primary T helper cells fromperipheralblood blood
11 chr1:93454800-93456400 Enhancers NHDF-Ad bronchial
12 chr1:93454800-93458200 Enhancers Primary T killer naive cells fromperipheralblood blood
13 chr1:93454800-93459800 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr1:93455000-93456400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:93455000-93457400 Enhancers HepG2 liver
16 chr1:93455200-93457800 Enhancers Fetal Thymus thymus
17 chr1:93455200-93457800 Enhancers K562 blood
18 chr1:93455400-93459800 Enhancers Primary B cells from peripheral blood blood
19 chr1:93455800-93456600 Flanking Active TSS Dnd41 blood
20 chr1:93455800-93457000 Enhancers Primary hematopoietic stem cells blood
21 chr1:93455800-93457000 Enhancers Pancreatic Islets Pancreatic Islet
22 chr1:93455800-93457400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:93455800-93457400 Enhancers Thymus Thymus
24 chr1:93455800-93457600 Enhancers Primary T regulatory cells fromperipheralblood blood
25 chr1:93455800-93457600 Enhancers Primary mononuclear cells fromperipheralblood Blood
26 chr1:93455800-93457800 Enhancers Primary B cells from cord blood blood
27 chr1:93456000-93456200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:93456000-93456200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
29 chr1:93456000-93456200 Enhancers Primary T helper cells PMA-I stimulated --
30 chr1:93456000-93456400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:93456000-93456600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
32 chr1:93456000-93457600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:93456000-93457600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:93456000-93461000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015