Variant report

Variant rs451881
Chromosome Location chr5:52937837-52937838
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:52903000-52943800 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr5:52903200-52939200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr5:52904400-52966600 Weak transcription Osteobl bone
4 chr5:52910600-52941000 Weak transcription Rectal Smooth Muscle rectum
5 chr5:52919200-52944000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:52920800-52940800 Weak transcription HepG2 liver
7 chr5:52920800-52978800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr5:52921000-52941800 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr5:52921600-52963400 Weak transcription A549 lung
10 chr5:52922000-52939400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr5:52922000-52942000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr5:52925600-52961200 Weak transcription Esophagus oesophagus
13 chr5:52925800-52952000 Weak transcription Colonic Mucosa Colon
14 chr5:52926000-52941800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr5:52926000-52943800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr5:52926600-52948800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr5:52926800-52963600 Weak transcription Brain Inferior Temporal Lobe brain
18 chr5:52927400-52945000 Weak transcription Fetal Brain Female brain
19 chr5:52927400-52961000 Weak transcription Placenta Placenta
20 chr5:52927600-52942400 Weak transcription Fetal Thymus thymus
21 chr5:52927800-52938000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr5:52927800-52948600 Weak transcription Pancreas Pancrea
23 chr5:52927800-52961200 Weak transcription H1 Cell Line embryonic stem cell
24 chr5:52927800-52961200 Weak transcription Stomach Smooth Muscle stomach
25 chr5:52927800-52961200 Weak transcription Thymus Thymus
26 chr5:52928000-52945000 Weak transcription Fetal Intestine Small intestine
27 chr5:52928000-52946000 Weak transcription Gastric stomach
28 chr5:52928000-52962200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr5:52928200-52944000 Weak transcription GM12878-XiMat blood
30 chr5:52928400-52942000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr5:52928600-52944400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr5:52929000-52981800 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr5:52929200-52941800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr5:52929200-52942000 Weak transcription Dnd41 blood
35 chr5:52929200-52943200 Weak transcription Duodenum Mucosa Duodenum
36 chr5:52929200-52947600 Weak transcription Right Ventricle heart
37 chr5:52929400-52939200 Weak transcription ES-WA7 Cell Line embryonic stem cell
38 chr5:52929400-52944400 Weak transcription Rectal Mucosa Donor 29 rectum
39 chr5:52929400-52964600 Weak transcription Brain Cingulate Gyrus brain
40 chr5:52929600-52941600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr5:52930200-52938000 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr5:52931000-52944600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr5:52933200-52939400 Weak transcription Brain Angular Gyrus brain
44 chr5:52933200-52943000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr5:52933200-52951600 Weak transcription Aorta Aorta
46 chr5:52933400-52941600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
47 chr5:52935200-52978000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
48 chr5:52936200-52938600 Strong transcription Primary B cells from peripheral blood blood
49 chr5:52936200-52938800 Enhancers HSMMtube muscle
50 chr5:52936600-52938200 Weak transcription Brain Anterior Caudate brain

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