The 2.0 version of rSNPBase

Variant report

Variant rs4556337
Chromosome Location chr1:193378149-193378150
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:193373800-193381000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr1:193376200-193379000 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr1:193376400-193378200 Weak transcription NHLF lung
4 chr1:193376400-193380000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:193376600-193378600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr1:193376600-193379800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr1:193376600-193380000 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr1:193376600-193380200 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:193376600-193380400 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:193376600-193380600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:193376600-193380600 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr1:193376600-193380800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr1:193376600-193381200 Weak transcription Fetal Kidney kidney
14 chr1:193376800-193380200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr1:193376800-193380600 Weak transcription Primary T cells from cord blood blood
16 chr1:193376800-193380600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:193377200-193378200 Enhancers Pancreas Pancrea
18 chr1:193377200-193379000 Enhancers Fetal Heart heart
19 chr1:193377200-193379000 Enhancers Fetal Intestine Large intestine
20 chr1:193377400-193378600 Enhancers NH-A brain
21 chr1:193377600-193379800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:193377600-193380200 Enhancers Fetal Lung lung
23 chr1:193377800-193378200 Active TSS Colon Smooth Muscle Colon
24 chr1:193377800-193378400 Active TSS Right Atrium heart
25 chr1:193377800-193378600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:193377800-193379000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:193378000-193378200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr1:193378000-193378200 Flanking Active TSS Duodenum Mucosa Duodenum
29 chr1:193378000-193378400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:193378000-193378400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr1:193378000-193378400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
32 chr1:193378000-193378400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:193378000-193378400 Active TSS Muscle Satellite Cultured Cells --
34 chr1:193378000-193378400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
35 chr1:193378000-193378400 Active TSS Aorta Aorta
36 chr1:193378000-193378400 Flanking Active TSS Fetal Intestine Small intestine
37 chr1:193378000-193378400 Enhancers Fetal Muscle Leg muscle
38 chr1:193378000-193378400 Enhancers Fetal Thymus thymus
39 chr1:193378000-193378400 Active TSS Left Ventricle heart
40 chr1:193378000-193378400 Active TSS Ovary ovary
41 chr1:193378000-193378400 Flanking Active TSS Rectal Smooth Muscle rectum
42 chr1:193378000-193378400 Active TSS Right Ventricle heart
43 chr1:193378000-193378400 Active TSS Stomach Smooth Muscle stomach
44 chr1:193378000-193378400 Flanking Active TSS A549 lung
45 chr1:193378000-193378400 Enhancers HSMMtube muscle
46 chr1:193378000-193378400 Flanking Active TSS HUVEC blood vessel
47 chr1:193378000-193378400 Active TSS NHDF-Ad bronchial
48 chr1:193378000-193378400 Flanking Active TSS NHEK skin
49 chr1:193378000-193378400 Flanking Active TSS Osteobl bone
50 chr1:193378000-193378600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015