Variant report

Variant	rs4600606
Chromosome Location	chr2:180494992-180494993
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11687033	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11688746	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12612821	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13004211	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13009601	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1399686	0.86[ASN][1000 genomes]
rs1515274	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1515277	0.86[ASN][1000 genomes]
rs1515278	0.86[ASN][1000 genomes]
rs16866871	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36017881	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62176331	0.87[ASN][1000 genomes]
rs6741622	0.91[ASN][1000 genomes]
rs7581924	0.88[ASN][1000 genomes]
rs9750247	0.96[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180489600-180500800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr2:180494400-180495000	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr2:180494400-180495000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:180494400-180495000	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr2:180494400-180495200	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr2:180494400-180495200	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr2:180494600-180495000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr2:180494600-180495000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr2:180494600-180495200	Enhancers	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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