Variant report

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10451600	0.81[ASN][1000 genomes]
rs10496490	0.81[ASN][1000 genomes]
rs11678564	0.84[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11690705	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11691866	0.82[AMR][1000 genomes]
rs11695752	0.84[AMR][1000 genomes]
rs11883530	0.81[ASN][1000 genomes]
rs11898241	0.81[ASN][1000 genomes]
rs11898436	0.81[ASN][1000 genomes]
rs12611770	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1356384	0.81[ASN][1000 genomes]
rs1400660	0.81[ASN][1000 genomes]
rs1400668	0.82[ASN][1000 genomes]
rs1517362	0.81[ASN][1000 genomes]
rs1607914	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2420819	0.82[ASN][1000 genomes]
rs2421100	0.81[ASN][1000 genomes]
rs4241133	0.99[ASN][1000 genomes]
rs4268936	0.81[ASN][1000 genomes]
rs4429481	0.84[AMR][1000 genomes]
rs4610067	0.81[ASN][1000 genomes]
rs4624386	0.82[AMR][1000 genomes]
rs4629160	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62167292	0.92[ASN][1000 genomes]
rs62167293	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6542259	0.81[ASN][1000 genomes]
rs6726183	0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7563562	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7589983	0.81[ASN][1000 genomes]
rs7598070	0.82[AMR][1000 genomes]
rs7606313	0.82[AMR][1000 genomes]
rs908599	0.81[ASN][1000 genomes]
rs908600	0.91[ASN][1000 genomes]
rs992218	0.82[ASN][1000 genomes]
rs993986	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1001542	chr2:115920847-116082585	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv834339	chr2:115953298-116132979	Enhancers Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:116043000-116051600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr2:116043400-116052400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr2:116050200-116050800	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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