The 2.0 version of rSNPBase

Variant report

Variant rs4630693
Chromosome Location chr9:5433747-5433748
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:5376000-5436800 Weak transcription Psoas Muscle Psoas
2 chr9:5408800-5435400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr9:5409800-5436400 Weak transcription Small Intestine intestine
4 chr9:5410000-5435400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr9:5410000-5435400 Weak transcription Dnd41 blood
6 chr9:5415400-5437000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr9:5416800-5435400 Weak transcription Fetal Lung lung
8 chr9:5418000-5434200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr9:5418400-5436600 Weak transcription Monocytes-CD14+_RO01746 blood
10 chr9:5419000-5435400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr9:5419000-5435400 Weak transcription HSMMtube muscle
12 chr9:5419200-5435400 Weak transcription Rectal Smooth Muscle rectum
13 chr9:5419200-5437000 Weak transcription Aorta Aorta
14 chr9:5419200-5437000 Weak transcription Pancreas Pancrea
15 chr9:5419600-5435400 Weak transcription Skeletal Muscle Male skeletal muscle
16 chr9:5420000-5436800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr9:5423600-5435600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr9:5425000-5435600 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr9:5425200-5435600 Weak transcription Fetal Heart heart
20 chr9:5425400-5435800 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr9:5425600-5435400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr9:5426000-5433800 Strong transcription Primary T cells from cord blood blood
23 chr9:5426000-5435600 Weak transcription A549 lung
24 chr9:5426200-5435400 Weak transcription Colon Smooth Muscle Colon
25 chr9:5426200-5436400 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr9:5426400-5435400 Weak transcription Fetal Kidney kidney
27 chr9:5426600-5435400 Strong transcription Breast Myoepithelial Primary Cells Breast
28 chr9:5427000-5435600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr9:5427600-5436000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr9:5428000-5435600 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr9:5428000-5436600 Strong transcription Fetal Muscle Trunk muscle
32 chr9:5428200-5436000 Strong transcription Primary T cells fromperipheralblood blood
33 chr9:5428600-5435400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr9:5428600-5435600 Weak transcription HMEC breast
35 chr9:5428800-5434600 Weak transcription Right Ventricle heart
36 chr9:5429400-5434200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr9:5429400-5435800 Strong transcription Rectal Mucosa Donor 29 rectum
38 chr9:5429600-5436600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr9:5430000-5435400 Strong transcription Sigmoid Colon Sigmoid Colon
40 chr9:5430200-5435400 Weak transcription Adipose Nuclei Adipose
41 chr9:5430200-5435400 Weak transcription Osteobl bone
42 chr9:5430400-5434400 Weak transcription Left Ventricle heart
43 chr9:5430400-5435400 Weak transcription Brain Angular Gyrus brain
44 chr9:5430400-5436600 Weak transcription Primary hematopoietic stem cells blood
45 chr9:5430600-5436400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr9:5430800-5435400 Weak transcription Duodenum Mucosa Duodenum
47 chr9:5430800-5436000 Weak transcription Brain Substantia Nigra brain
48 chr9:5430800-5436600 Weak transcription Brain Inferior Temporal Lobe brain
49 chr9:5431000-5435400 Weak transcription HSMM muscle
50 chr9:5431200-5434400 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015