The 2.0 version of rSNPBase

Variant report

Variant rs4657122
Chromosome Location chr1:161887355-161887356
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:161836600-161888400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:161861600-161891400 Weak transcription Rectal Smooth Muscle rectum
4 chr1:161861600-161906400 Weak transcription Stomach Smooth Muscle stomach
5 chr1:161861600-161936000 Weak transcription Fetal Intestine Small intestine
6 chr1:161875600-161888400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:161877400-161891400 Weak transcription Colon Smooth Muscle Colon
8 chr1:161878200-161888200 Weak transcription Fetal Heart heart
9 chr1:161880000-161890600 Weak transcription Fetal Muscle Trunk muscle
10 chr1:161880000-161891600 Weak transcription Fetal Stomach stomach
11 chr1:161880400-161888400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:161880600-161888000 Weak transcription Right Ventricle heart
13 chr1:161880600-161890800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr1:161880600-161892000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr1:161880800-161888400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr1:161880800-161891200 Weak transcription Brain Hippocampus Middle brain
17 chr1:161880800-161891200 Weak transcription NHLF lung
18 chr1:161881000-161890600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr1:161881600-161898800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr1:161881600-161912000 Weak transcription Aorta Aorta
21 chr1:161881800-161890400 Weak transcription HSMMtube muscle
22 chr1:161882000-161887400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:161882000-161887800 Weak transcription Spleen Spleen
24 chr1:161882200-161888400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:161882200-161889400 Weak transcription Brain Substantia Nigra brain
26 chr1:161883000-161898600 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr1:161883200-161888400 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:161883200-161916000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:161883400-161896200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr1:161883400-161928200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr1:161883800-161887600 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr1:161884000-161890400 Weak transcription NHDF-Ad bronchial
33 chr1:161884200-161890200 Weak transcription HMEC breast
34 chr1:161884200-161910800 Weak transcription HepG2 liver
35 chr1:161884400-161896000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr1:161884600-161927600 Weak transcription NHEK skin
37 chr1:161884800-161887600 Weak transcription Brain Cingulate Gyrus brain
38 chr1:161884800-161890400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr1:161884800-161922600 Weak transcription Brain Anterior Caudate brain
40 chr1:161885000-161888400 Weak transcription Primary T cells from cord blood blood
41 chr1:161885000-161890800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:161885000-161910600 Weak transcription Gastric stomach
43 chr1:161885000-161914400 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:161885000-161928000 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:161885200-161888000 Weak transcription Fetal Brain Female brain
46 chr1:161885200-161888400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr1:161885200-161888400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:161885200-161890400 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:161885200-161890400 Weak transcription NH-A brain
50 chr1:161885200-161891000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015