The 2.0 version of rSNPBase

Variant report

Variant rs10159039
Chromosome Location chr1:161911373-161911374
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:161861600-161936000 Weak transcription Fetal Intestine Small intestine
3 chr1:161881600-161912000 Weak transcription Aorta Aorta
4 chr1:161883200-161916000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:161883400-161928200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr1:161884600-161927600 Weak transcription NHEK skin
7 chr1:161884800-161922600 Weak transcription Brain Anterior Caudate brain
8 chr1:161885000-161914400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:161885000-161928000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:161885200-161911800 Weak transcription Left Ventricle heart
11 chr1:161885800-161919200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:161886000-161911600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:161886000-161911800 Weak transcription Placenta Placenta
14 chr1:161886000-161912000 Weak transcription Lung lung
15 chr1:161886000-161912000 Weak transcription Pancreas Pancrea
16 chr1:161886200-161912000 Weak transcription Fetal Intestine Large intestine
17 chr1:161887000-161918600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:161887000-161928200 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:161887200-161914200 Weak transcription Duodenum Mucosa Duodenum
20 chr1:161887200-161915600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:161887200-161929600 Weak transcription Hela-S3 cervix
22 chr1:161891000-161912800 Weak transcription Fetal Muscle Leg muscle
23 chr1:161891000-161915600 Weak transcription Fetal Muscle Trunk muscle
24 chr1:161891800-161915800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:161896200-161916400 Weak transcription Fetal Stomach stomach
26 chr1:161896600-161911800 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr1:161897800-161928400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:161897800-161940000 Weak transcription Brain Germinal Matrix brain
29 chr1:161899400-161914400 Weak transcription Psoas Muscle Psoas
30 chr1:161899800-161918400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:161900000-161914200 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr1:161900000-161916000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:161900200-161918600 Weak transcription Rectal Smooth Muscle rectum
34 chr1:161900600-161911600 Weak transcription NH-A brain
35 chr1:161900600-161914000 Weak transcription HUVEC blood vessel
36 chr1:161900600-161915600 Weak transcription HSMM muscle
37 chr1:161900600-161915600 Weak transcription NHLF lung
38 chr1:161901400-161935400 Weak transcription Fetal Lung lung
39 chr1:161902400-161923000 Weak transcription Brain Substantia Nigra brain
40 chr1:161902800-161943400 Weak transcription Esophagus oesophagus
41 chr1:161903600-161930400 Weak transcription Fetal Brain Female brain
42 chr1:161903800-161914400 Weak transcription Spleen Spleen
43 chr1:161903800-161918800 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr1:161903800-161923800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:161904400-161915600 Weak transcription HSMMtube muscle
46 chr1:161904400-161923200 Weak transcription Brain Cingulate Gyrus brain
47 chr1:161904800-161956600 Weak transcription Fetal Brain Male brain
48 chr1:161905000-161920600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:161905200-161911800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr1:161905200-161912000 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015