The 2.0 version of rSNPBase

Variant report

Variant rs6683712
Chromosome Location chr1:161890284-161890285
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:161824200-161928400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:161861600-161891400 Weak transcription Rectal Smooth Muscle rectum
3 chr1:161861600-161906400 Weak transcription Stomach Smooth Muscle stomach
4 chr1:161861600-161936000 Weak transcription Fetal Intestine Small intestine
5 chr1:161877400-161891400 Weak transcription Colon Smooth Muscle Colon
6 chr1:161880000-161890600 Weak transcription Fetal Muscle Trunk muscle
7 chr1:161880000-161891600 Weak transcription Fetal Stomach stomach
8 chr1:161880600-161890800 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr1:161880600-161892000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:161880800-161891200 Weak transcription Brain Hippocampus Middle brain
11 chr1:161880800-161891200 Weak transcription NHLF lung
12 chr1:161881000-161890600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:161881600-161898800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:161881600-161912000 Weak transcription Aorta Aorta
15 chr1:161881800-161890400 Weak transcription HSMMtube muscle
16 chr1:161883000-161898600 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr1:161883200-161916000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:161883400-161896200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:161883400-161928200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:161884000-161890400 Weak transcription NHDF-Ad bronchial
21 chr1:161884200-161910800 Weak transcription HepG2 liver
22 chr1:161884400-161896000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr1:161884600-161927600 Weak transcription NHEK skin
24 chr1:161884800-161890400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:161884800-161922600 Weak transcription Brain Anterior Caudate brain
26 chr1:161885000-161890800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:161885000-161910600 Weak transcription Gastric stomach
28 chr1:161885000-161914400 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr1:161885000-161928000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:161885200-161890400 Weak transcription Muscle Satellite Cultured Cells --
31 chr1:161885200-161890400 Weak transcription NH-A brain
32 chr1:161885200-161891000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:161885200-161891600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr1:161885200-161891600 Weak transcription HUVEC blood vessel
35 chr1:161885200-161903600 Weak transcription Thymus Thymus
36 chr1:161885200-161911800 Weak transcription Left Ventricle heart
37 chr1:161885400-161890400 Weak transcription HSMM muscle
38 chr1:161885400-161890400 Weak transcription Osteobl bone
39 chr1:161885400-161896000 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr1:161885400-161903600 Weak transcription Fetal Thymus thymus
41 chr1:161885400-161906200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:161885600-161890800 Weak transcription Fetal Lung lung
43 chr1:161885600-161893000 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:161885600-161896200 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr1:161885600-161899000 Weak transcription Ovary ovary
46 chr1:161885600-161905000 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr1:161885800-161890600 Weak transcription Fetal Muscle Leg muscle
48 chr1:161885800-161919200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr1:161886000-161890600 Weak transcription Psoas Muscle Psoas
50 chr1:161886000-161892000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015