Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10191921	0.89[ASN][1000 genomes]
rs10210622	0.83[ASN][1000 genomes]
rs11885348	0.89[ASN][1000 genomes]
rs12463546	0.97[ASN][1000 genomes]
rs12475356	0.97[ASN][1000 genomes]
rs13407023	0.92[ASN][1000 genomes]
rs1595063	1.00[CHB][hapmap]
rs1595322	0.83[ASN][1000 genomes]
rs1821657	0.81[CHB][hapmap]
rs1837137	0.89[ASN][1000 genomes]
rs1866195	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4356605	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4672607	0.95[ASN][1000 genomes]
rs4673581	0.83[ASN][1000 genomes]
rs4673591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4673592	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4673594	1.00[ASN][1000 genomes]
rs57962173	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58740402	0.97[ASN][1000 genomes]
rs59871753	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6435604	0.92[ASN][1000 genomes]
rs72941629	0.92[ASN][1000 genomes]
rs72941633	0.92[ASN][1000 genomes]
rs73075664	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012193	chr2:211684524-212072213	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv834521	chr2:211918881-212057872	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv875774	chr2:212016056-212047120	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv875775	chr2:212021755-212047120	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212039000-212045800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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