Variant report

Variant	rs4698793
Chromosome Location	chr4:110729326-110729327
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10856999	0.83[AFR][1000 genomes]
rs10857000	0.83[AFR][1000 genomes]
rs11098045	0.83[AFR][1000 genomes]
rs13152659	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16997098	1.00[AMR][1000 genomes]
rs17008352	1.00[AMR][1000 genomes]
rs17040722	1.00[AMR][1000 genomes]
rs2158205	1.00[AMR][1000 genomes]
rs4698791	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs5030607	1.00[AMR][1000 genomes]
rs58064325	1.00[AMR][1000 genomes]
rs60211464	1.00[AMR][1000 genomes]
rs61490251	1.00[AMR][1000 genomes]
rs61735996	1.00[AMR][1000 genomes]
rs6533454	1.00[AMR][1000 genomes]
rs6533456	0.83[AFR][1000 genomes]
rs6533458	0.83[AFR][1000 genomes]
rs6533459	0.83[AFR][1000 genomes]
rs6533461	0.96[AFR][1000 genomes]
rs6533466	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6823460	1.00[AMR][1000 genomes]
rs6823468	1.00[AMR][1000 genomes]
rs6847144	1.00[AMR][1000 genomes]
rs6850937	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6851274	1.00[AMR][1000 genomes]
rs6855330	1.00[AMR][1000 genomes]
rs72674844	1.00[AMR][1000 genomes]
rs7435548	0.83[AFR][1000 genomes]
rs7439880	0.83[AFR][1000 genomes]
rs7442505	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7674237	0.83[AFR][1000 genomes]
rs7675451	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530156	chr4:110721397-110911297	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:110722600-110736200	Weak transcription	Pancreas	Pancrea
2	chr4:110722800-110735800	Weak transcription	Brain Hippocampus Middle	brain
3	chr4:110724400-110735800	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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