Variant report

Variant	rs4705660
Chromosome Location	chr5:113632103-113632104
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11241274	0.90[ASN][1000 genomes]
rs11743003	0.86[ASN][1000 genomes]
rs11958855	0.90[ASN][1000 genomes]
rs13155731	0.80[CHB][hapmap]
rs13173796	0.80[CHB][hapmap]
rs13178721	0.86[ASN][1000 genomes]
rs13186627	0.88[CHB][hapmap]
rs13187753	0.90[CHB][hapmap]
rs13190573	0.98[ASN][1000 genomes]
rs1457761	0.81[CHB][hapmap]
rs1993516	0.88[ASN][1000 genomes]
rs4705504	0.80[CHB][hapmap]
rs4705665	0.80[CHB][hapmap];0.87[GIH][hapmap]
rs4705668	0.80[CHB][hapmap]
rs554843	0.80[ASN][1000 genomes]
rs607821	0.80[ASN][1000 genomes]
rs7734407	0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024203	chr5:113596392-113659935	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1021335	chr5:113599444-113659146	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv537866	chr5:113599444-113659146	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113631800-113633000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr5:113631800-113633200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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