Variant report
Variant | rs4707890 |
---|---|
Chromosome Location | chr6:71764224-71764225 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1033608 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs11759339 | 1.00[CHB][hapmap] |
rs1418677 | 0.95[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1578730 | 0.93[EUR][1000 genomes] |
rs1578731 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs16869607 | 1.00[CHB][hapmap] |
rs1891522 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1935811 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs2103857 | 0.92[EUR][1000 genomes] |
rs2103858 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs4707892 | 0.93[EUR][1000 genomes] |
rs55666367 | 0.81[AFR][1000 genomes] |
rs56365444 | 0.87[AFR][1000 genomes] |
rs59282007 | 0.90[AFR][1000 genomes] |
rs60100541 | 0.87[AFR][1000 genomes] |
rs60222660 | 0.87[AFR][1000 genomes] |
rs6455403 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs6907179 | 1.00[CHB][hapmap] |
rs6911809 | 1.00[CHB][hapmap];0.90[YRI][hapmap] |
rs718355 | 0.95[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs73497926 | 0.86[AFR][1000 genomes] |
rs73497994 | 0.87[AFR][1000 genomes] |
rs73498904 | 0.81[AFR][1000 genomes] |
rs767990 | 0.98[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7743868 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs7762477 | 0.87[AFR][1000 genomes] |
rs7766695 | 0.93[EUR][1000 genomes] |
rs7774025 | 1.00[CHB][hapmap] |
rs9294885 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs9346424 | 0.93[EUR][1000 genomes] |
rs9346425 | 0.93[EUR][1000 genomes] |
rs9354961 | 1.00[CHB][hapmap];0.85[YRI][hapmap] |
rs9446327 | 0.81[AMR][1000 genomes] |
rs9455309 | 0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:71763000-71765800 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
2 | chr6:71763200-71765800 | Weak transcription | Brain Germinal Matrix | brain |