Variant report

Variant	rs718355
Chromosome Location	chr6:71792905-71792906
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:71791384..71793832-chr6:71796277..71798212,2	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs1033608	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11759339	1.00[CHB][hapmap]
rs1342760	0.81[AMR][1000 genomes]
rs1418677	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1578730	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1578731	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs16869607	1.00[CHB][hapmap]
rs1891522	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1935811	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2103857	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2103858	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4707890	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4707892	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6455403	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6907179	1.00[CHB][hapmap]
rs6911809	1.00[CHB][hapmap]
rs767990	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7743868	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7766695	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7774025	1.00[CHB][hapmap]
rs9294885	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9346424	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9346425	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9354961	1.00[CHB][hapmap]
rs9446327	0.83[AMR][1000 genomes]
rs9455309	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71789000-71793600	Enhancers	Fetal Lung	lung
2	chr6:71791200-71793400	Enhancers	Fetal Muscle Leg	muscle
3	chr6:71791400-71793400	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr6:71791600-71793200	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr6:71791800-71793000	Flanking Active TSS	NHLF	lung
6	chr6:71791800-71797600	Weak transcription	Fetal Stomach	stomach
7	chr6:71792000-71793200	Enhancers	Brain Angular Gyrus	brain
8	chr6:71792200-71793000	Enhancers	Colon Smooth Muscle	Colon
9	chr6:71792200-71793000	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr6:71792400-71793000	Enhancers	Muscle Satellite Cultured Cells	--
11	chr6:71792400-71793000	Enhancers	Brain Cingulate Gyrus	brain
12	chr6:71792400-71793000	Enhancers	Brain Hippocampus Middle	brain
13	chr6:71792400-71793000	Enhancers	Duodenum Smooth Muscle	Duodenum
14	chr6:71792400-71793000	Enhancers	Left Ventricle	heart
15	chr6:71792400-71793000	Enhancers	HSMMtube	muscle
16	chr6:71792400-71793000	Enhancers	NHDF-Ad	bronchial
17	chr6:71792400-71793200	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr6:71792400-71793200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr6:71792400-71793200	Enhancers	Right Atrium	heart
20	chr6:71792400-71793400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr6:71792600-71793000	Enhancers	Aorta	Aorta
22	chr6:71792600-71793600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr6:71792800-71793000	Enhancers	Skeletal Muscle Male	skeletal muscle
24	chr6:71792800-71793200	Enhancers	Brain Anterior Caudate	brain
25	chr6:71792800-71793200	Enhancers	Brain Germinal Matrix	brain
26	chr6:71792800-71793200	Enhancers	Brain Substantia Nigra	brain

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