Variant report

Variant rs4713966
Chromosome Location chr6:11854669-11854670
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:11847000-11854800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr6:11850000-11854800 Weak transcription HUVEC blood vessel
3 chr6:11850400-11854800 Weak transcription Pancreas Pancrea
4 chr6:11852000-11866200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:11852400-11855000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr6:11852600-11854800 Weak transcription HMEC breast
7 chr6:11852600-11855200 Enhancers Primary monocytes fromperipheralblood blood
8 chr6:11852600-11855200 Enhancers Fetal Lung lung
9 chr6:11852600-11855200 Enhancers Fetal Stomach stomach
10 chr6:11852800-11854800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr6:11852800-11855400 Enhancers Fetal Muscle Leg muscle
12 chr6:11853000-11855200 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr6:11853200-11854800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr6:11853200-11855200 Enhancers Colon Smooth Muscle Colon
15 chr6:11853200-11855400 Enhancers Monocytes-CD14+_RO01746 blood
16 chr6:11853800-11855200 Enhancers Primary hematopoietic stem cells blood
17 chr6:11853800-11855200 Enhancers Duodenum Smooth Muscle Duodenum
18 chr6:11853800-11855200 Enhancers Stomach Mucosa stomach
19 chr6:11853800-11855600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr6:11853800-11855600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr6:11854000-11854800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:11854000-11854800 Enhancers Brain Cingulate Gyrus brain
23 chr6:11854000-11855000 Enhancers Ovary ovary
24 chr6:11854000-11855200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr6:11854000-11855200 Enhancers Adipose Nuclei Adipose
26 chr6:11854000-11855200 Enhancers Aorta Aorta
27 chr6:11854000-11855200 Enhancers HSMMtube muscle
28 chr6:11854000-11855200 Enhancers NHLF lung
29 chr6:11854000-11855800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:11854000-11855800 Enhancers Osteobl bone
31 chr6:11854200-11854800 Enhancers Stomach Smooth Muscle stomach
32 chr6:11854200-11855000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr6:11854200-11855000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr6:11854400-11855600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr6:11854400-11856600 ZNF genes & repeats GM12878-XiMat blood
36 chr6:11854600-11855000 Flanking Active TSS Liver Liver
37 chr6:11854600-11855000 Enhancers Sigmoid Colon Sigmoid Colon
38 chr6:11854600-11855200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:11854600-11855200 Enhancers Gastric stomach
40 chr6:11854600-11855200 Enhancers NHEK skin
41 chr6:11854600-11855400 Enhancers Muscle Satellite Cultured Cells --
42 chr6:11854600-11855400 Enhancers NH-A brain
43 chr6:11854600-11855600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr6:11854600-11855600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:11854600-11855600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
46 chr6:11854600-11855600 Enhancers Fetal Adrenal Gland Adrenal Gland
47 chr6:11854600-11855600 Enhancers HSMM muscle
48 chr6:11854600-11855800 Enhancers NHDF-Ad bronchial
49 chr6:11854600-11856200 Enhancers Hela-S3 cervix

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